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cn_combo_scaffold_120_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(27222..27791)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00037CF4A0 similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 186.0
  • Bit_score: 336
  • Evalue 1.90e-89
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 315
  • Evalue 1.20e-83
Uncharacterized protein {ECO:0000313|EMBL:ADU35121.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 315
  • Evalue 6.20e-83

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGCAGCAGCCCGCCACCTTCTTCGAGCGGCCCACGCTGGGCCACCTGATCGCCGGCACGATGGCGATGGCAGCCGTGGTGCTGGCCTCCAACATCCTGGTGCAGTTCGCCATCAACGACTGGCTGACCTGGGGCGCCTTCACCTATCCGGTGGCCTACCTCGTGAGCGATCTGGTCAACCGGCGCTTCGGTCCCGGCATGGCGCGGCGCGTGGCGTGGGTGGGCTTCGCCGTGGCCGTGGGCGTGTCGCTGCTGCTGGCGCCGGTGCGCATCGCGGCGGCCTCGGGCCTGGCCTTCATCGCCTCGCAGCTGCTGGACATCGGCGTCTTCGACCGGCTTCGCCGGGGCCTGTGGTGGCGCGCGCCGCTGGTGGCAACCGTGGTTGCCGCCGTGCTCGACAGCATCGTGTTCTGGGGCATCGCCTTCGCGGGCACCGACGGCCCCTGGCTCACCTGGGCGCTGGGCGACCTGGGCGTGAAGCTCGCCGTCGGCGTGTTGATGCTGCTGCCGTTCCGGCTGCTGATCGGCCGGCAGGCCGCGCAGGCGTCGCCGTCGGCCCTGAGCCACTGA
PROTEIN sequence
Length: 190
MQQPATFFERPTLGHLIAGTMAMAAVVLASNILVQFAINDWLTWGAFTYPVAYLVSDLVNRRFGPGMARRVAWVGFAVAVGVSLLLAPVRIAAASGLAFIASQLLDIGVFDRLRRGLWWRAPLVATVVAAVLDSIVFWGIAFAGTDGPWLTWALGDLGVKLAVGVLMLLPFRLLIGRQAAQASPSALSH*