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cn_combo_scaffold_112_10

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 9150..9473

Top 3 Functional Annotations

Value Algorithm Source
ferredoxin n=1 Tax=Variovorax paradoxus RepID=UPI00035E9D74 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 107.0
  • Bit_score: 218
  • Evalue 3.20e-54
Ferredoxin {ECO:0000313|EMBL:EJL69103.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 107.0
  • Bit_score: 212
  • Evalue 4.20e-52
putative ferredoxin similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 107.0
  • Bit_score: 207
  • Evalue 1.60e-51

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGCCCACGATCCACTACATCCTCAAGGACGGCACCACGCGCGACGTCGACGCCAAGGTCGGCGCCAGCGTGATGGAAACCGCCATTCGCGGCAACGTGCGCGGCATCGACGCCGAGTGCGGCGGCTGCTGCTCCTGCGCCACCTGCCACGTCTACGTGGACGACGCCTTCATCGACCTGCTGCCGCCGCCCGACGACATGGAAAGCGCGCTGCTCGACGCCGTCGCTTCCGAGCGCCGGCCCGGCTCCCGCCTGAGCTGCCAGCTCAGCATCACCGCGGCCTTCGATGGCCTCACGGTGCGGGTGCCCGATACCCAGGTCTGA
PROTEIN sequence
Length: 108
MPTIHYILKDGTTRDVDAKVGASVMETAIRGNVRGIDAECGGCCSCATCHVYVDDAFIDLLPPPDDMESALLDAVASERRPGSRLSCQLSITAAFDGLTVRVPDTQV*