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cn_combo_scaffold_112_12

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 10830..11690

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2JML7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 286.0
  • Bit_score: 544
  • Evalue 6.80e-152
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL69105.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 286.0
  • Bit_score: 544
  • Evalue 9.50e-152
putative high-affinity branched-chain amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 286.0
  • Bit_score: 535
  • Evalue 8.90e-150

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGGGCATCGTGATCTTCGATGGAGTGGCCTACGGCATGCTCCTGTTCCTCATCGGCGTGGGCCTGTCCATCACGATGGGGCTCATGAACTTCGTCAACCTCGCGCACGGCAGCTTCGCGATGGTGGGCGGCTACGTGGCCGCCGTGCTGATGAACCACTTCGGGCTCGGCTTCGGCCTCTCGCTGGCGGCCGCCTTCGTGGCGGCGGCGCTGGTGGGCGCGGTGCTGGAGTTCGTGTTCTACCGCCGGCTGTACCGCGCGCATCCGCTCGACCAGGTGCTGCTGTCGATCGGCGTGGTGTTCGTGTCGATCGCGGCATTCACCTATTTCTTCGGCCCGACGATGCAGCCCTTCACGTTGCCCGCGGCGCTCGACGGGCAGGTGTCGCTACTGGGCATGGAGGTGGGACGCTACCGGCTGTTCCTGATCGCCTGCGGCGCGGCGGTGCTCGTCGCCCTGCTGCTGGGCCTGGGCAAGACCCGCTACGGCGCCATGGTGCGCGCGGCGGTGGACAACCAGCGCGTGGCCGGCGGCACCGGCATCCACGTGCAGCGCCTCTTTTTTCTGACCTTCTCGCTGGGCTGCGGCCTCGCCGGCCTGGGCGGCGCGCTGAGCCTGGGCATGCTGGGGCTGGAGCCATCGTTCCCGCTCAAGTACCTCGTCTACTTTCTGATGGTGGTGTGCGTGGGCGGTGCGGGCACCGTCACCGGGCCATTCATCGCGGCGCTGCTGGTCGGCATCGTCGACGTGGCGGGCAAGTACTACCTGCCCGAAGCCGGCGCCTTTCTCATCTATGTCTTCATGATCGTCATGCTGCTGGTGCGCCCGAACGGCATCGTCGCCAAGAAGGGGCTCGCATGA
PROTEIN sequence
Length: 287
MGIVIFDGVAYGMLLFLIGVGLSITMGLMNFVNLAHGSFAMVGGYVAAVLMNHFGLGFGLSLAAAFVAAALVGAVLEFVFYRRLYRAHPLDQVLLSIGVVFVSIAAFTYFFGPTMQPFTLPAALDGQVSLLGMEVGRYRLFLIACGAAVLVALLLGLGKTRYGAMVRAAVDNQRVAGGTGIHVQRLFFLTFSLGCGLAGLGGALSLGMLGLEPSFPLKYLVYFLMVVCVGGAGTVTGPFIAALLVGIVDVAGKYYLPEAGAFLIYVFMIVMLLVRPNGIVAKKGLA*