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cn_combo_scaffold_112_15

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 13409..14113

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2K7B3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 234.0
  • Bit_score: 453
  • Evalue 1.30e-124
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL69108.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 234.0
  • Bit_score: 453
  • Evalue 1.80e-124
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 234.0
  • Bit_score: 440
  • Evalue 2.40e-121

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCCTGAAGCACTCGCCTTCGACCGCGTCACCGCCGGCTACGGCAACGCGGTCGTGCTCGACCGACTCGACTTTTCGCTGCAGCAGGGCGAAAGCCTCGCCATCCTCGGGCGCAACGGCGTGGGCAAGACCACGCTGCTCGAAACGCTGATGGGCAACACCCGCGTGATGCAGGGCGCGATCCGCTGGCAAGGCGCCGACATCACGCGCTGGCCCTCGCACCAGCGCGTGCGCGCCGGGCTGGGCTGGGTGCCGCAGGAGCGCGAGGTGTTTCCCTCCCTCACCGTGGAAGAAAACCTCACGGTGATCTCGCGGCTCGGCGGCTGGAATCTCAAGCGCGTCTACGACTTCTTTCCGCGCCTGCGCGAGCGGCGCGGCAACTACGGCAACCAGCTCTCGGGCGGCGAACAGCAGATGCTCGCCATCGGCCGCGCACTGATGACCAACCCCAGGCTGCTGCTGCTCGACGAGCCGATGGAAGGCTTGGCGCCGATCATCGTGGAAGAGCTGGCGGCCGCGATCCGCAGGCTGTGCGAATCGGAAGGGCTGGCCTCGATCGTGGTCGAGCAGCACCCGGTGCTGGCGCTGGAGATGACGCACAAGGCCATCGTGCTGGAGCGCGGCACCGTGGTGCACGCGGGCCCGAGCGCGGAGCTGGCGGCCGACCAAGAGTTACTGGAAGGCTTGCTGGGCGTCGGGGTTTGA
PROTEIN sequence
Length: 235
MPEALAFDRVTAGYGNAVVLDRLDFSLQQGESLAILGRNGVGKTTLLETLMGNTRVMQGAIRWQGADITRWPSHQRVRAGLGWVPQEREVFPSLTVEENLTVISRLGGWNLKRVYDFFPRLRERRGNYGNQLSGGEQQMLAIGRALMTNPRLLLLDEPMEGLAPIIVEELAAAIRRLCESEGLASIVVEQHPVLALEMTHKAIVLERGTVVHAGPSAELAADQELLEGLLGVGV*