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cn_combo_scaffold_112_16

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(14219..15376)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F679E similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 386.0
  • Bit_score: 700
  • Evalue 7.60e-199
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL69517.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 385.0
  • Bit_score: 700
  • Evalue 1.40e-198
putative extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 386.0
  • Bit_score: 674
  • Evalue 2.20e-191

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGACCGTTCCCGTGCCGCGCGAGTCGATTGCGCCGCTTTCCACCAGCCGTCGCCGTGCGCTGACCGGACTGGCCGCAACCGCCGCCGCGGGCCTGGGATTTCCGGCGCTGGCGCAGAACAAGCCGGTTCGCGTCGGGACCACCTTCGACAACAGCAGCGTGGAGAAGGCCAACGGGCAGGGGCTTTACCAGGGTTCGAGCGCTTTCTTCGCGGCGCTGAACAAGGCCGGCGGCATCAACGGCACCAAGGTCGAGCTCGTGATGGCCGACGACACCTTCAAGCCCGATGTGGCCAAGGCCAACGCGCTGGCCTTCGAGAAGGACAGCTCGGTGCTCGCGCTGGTGCACCCGCTGGGCACGCGCCAGACGGCCGAAGTGATGGACGCGGTGCCGGGCATGGCCGTGGTCGGCCCCATCACCGGCACCATCTCGCTGCGCAAGAAGGCGTCGCCCAACACCTTCTGGGTGCGCGCCAACTACGACCAGGAAGTCGACAAGCTGGTGAGCACGGCCGCCGTGCTGGGCCAGAGCCGCATCGGCCTCGTGCACTCGGACGATCCGCTGGGCCAATCGGTGCTGGCCGCGTTCAAGGCCTCGCTGGCCAAGGCCAAGCTGGAGCCGGCGGTGATCGCCACCACGCCCAACACCACCAGCATGGAAGTCGGCCCCGCCGCCGCGGCCATCGCCAAGGCCAAGCCGCAGGTGGTGGTGGTCGGGTTGGCGGGCACGGCGCCGGTGTTCCTGAAGGCGCTGCGCGAGGCGGGCAACAGCAGTTCGGCCTACGGCCTGTCGATCACGGCCAGCGCGCTCGCGGCCATGGGCGACCTGGCGCGCGGCCTGGGCTTCGTGATCGTGGTGCCTTCGCCGTATTCGACCAAGTACGAGATCGTGCGCCGCTACCAGGCCGACATGGTGGCCAGCGGCATCAAGGAGTTCTCGCTCACCAGCCTGGAGGGCTACATGAACGCCGCCGTGCTGGCAGAGGGCATGCGCCGCGCGGGCGGTTCGCTGACGCGCGCGTCGGTGATGTCGGGGCTGGCCAGCATCGAGAGCTTCGACCTGGGCGGGGTGAAGATCAACTACGGCCGCACCAACCGCGAAGGCGGCCAGTTCGTGGACGTGGCCGTGATCGGCAGCCGCGGCCAGATGCTCAGCTAG
PROTEIN sequence
Length: 386
MTVPVPRESIAPLSTSRRRALTGLAATAAAGLGFPALAQNKPVRVGTTFDNSSVEKANGQGLYQGSSAFFAALNKAGGINGTKVELVMADDTFKPDVAKANALAFEKDSSVLALVHPLGTRQTAEVMDAVPGMAVVGPITGTISLRKKASPNTFWVRANYDQEVDKLVSTAAVLGQSRIGLVHSDDPLGQSVLAAFKASLAKAKLEPAVIATTPNTTSMEVGPAAAAIAKAKPQVVVVGLAGTAPVFLKALREAGNSSSAYGLSITASALAAMGDLARGLGFVIVVPSPYSTKYEIVRRYQADMVASGIKEFSLTSLEGYMNAAVLAEGMRRAGGSLTRASVMSGLASIESFDLGGVKINYGRTNREGGQFVDVAVIGSRGQMLS*