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cn_combo_scaffold_112_22

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 23438..24367

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CDZ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 309.0
  • Bit_score: 514
  • Evalue 1.10e-142
Transcriptional regulator {ECO:0000313|EMBL:EJL69521.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 309.0
  • Bit_score: 514
  • Evalue 1.50e-142
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 316.0
  • Bit_score: 472
  • Evalue 1.30e-130

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCAGCTGCGCCAGCTCCAGCATCTCGTCGCCCTTGCCGACCAGGGCAGCTTCGGCCGCGCGGCACAGGCCGTGCATCTGTCGCAGCCTGCCCTCTCGCGCAGCATCGACAACCTCGAAGAGGTCCTGCAGGCCCGCCTGATCGACCGCGCCTACGGCACCGTGCGCTTCACCCAGGCCGGCGAGCTGGTGCTGGCGCGCGCCCGCGAGCTGCTGGCCGACGCCCGGCAGATCGAGCGCGACGTGCTGCAGCTCGAAGGCCTGGCCATCGGCAGCCTTGCGGTCGGCCTCGGCCCCTTCGCGGCCGGCACGCTCGGCCGCATGGCCCTGTCGCTCATGGCGCAGCGCCATCCGCAGCTGCTGATGCGCATGGAAGTGGCCGACACCGCCAGCCTGTGCGAGCGCCTGCACCGCCGCCAGCTCGACCTGTTCATCGCCGACACGCGCGATCTCGAGAAGAAGCAGCCGGGCCTGAAGCTGGCACGGCTGCCCAACGTGCCGGTGTCGTTCTTCGTGCGGCCGAAGCATCCGCTGCTGCGGCTGAAGCAGGTCACGCTCGACAAACTCATGGCGTACCCGGTGGCCGGCCCGCAGTTGCCCACCGAGGTGGCGGCGCAGTTCGACCGGCAGGCCAACCGAAGCAAAGGCAAGAGCGCCGATCGCGGCCTGTTCAACGTGAGCTGCGACGACGCGGGCACGCTGCGGCACCTGGCGCTCACGGCCAATGCGGCCATCCTCGCACCGCTGGCACCCGCGCCGGGGCACGAGACCGGCGCGCTGGTGCCGCTGCCGGTGGCCGGTCTCACAGGCATGCAAACGCATTACAGCCTGGTGACGCTCGCAGGGCGTACCCTCTCGCCTGCGGCCACCGCCTATTCCCGGCTGGTGACCGAGTTGATGAGCCCCGCCAAGCAGCCCCCCGGGCGCTGA
PROTEIN sequence
Length: 310
MQLRQLQHLVALADQGSFGRAAQAVHLSQPALSRSIDNLEEVLQARLIDRAYGTVRFTQAGELVLARARELLADARQIERDVLQLEGLAIGSLAVGLGPFAAGTLGRMALSLMAQRHPQLLMRMEVADTASLCERLHRRQLDLFIADTRDLEKKQPGLKLARLPNVPVSFFVRPKHPLLRLKQVTLDKLMAYPVAGPQLPTEVAAQFDRQANRSKGKSADRGLFNVSCDDAGTLRHLALTANAAILAPLAPAPGHETGALVPLPVAGLTGMQTHYSLVTLAGRTLSPAATAYSRLVTELMSPAKQPPGR*