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cn_combo_scaffold_112_30

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 30287..31480

Top 3 Functional Annotations

Value Algorithm Source
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4C3_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 397.0
  • Bit_score: 766
  • Evalue 1.50e-218
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 397.0
  • Bit_score: 766
  • Evalue 4.30e-219
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47286.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteoba similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 397.0
  • Bit_score: 766
  • Evalue 2.10e-218

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGACGAACGCTTTCAACCGCCGCCAGATCGTGAAGACCGGCGGCTCGATGATCGTGCTGGGCGCCGCGGGCGGCGTGGCCGGCATCGCATCGGCGCAGGACGGCAACACCGTGAAGCTGGGCCTGCTGCATTCGCTCTCGGGCACCATCGCCATCGCCGAGGCTTCGCTGGTCGATGCCGAAAAGCTCGCCATCGAGGAGATCAACGCGGCCGGCGGCGTGATGGGCAAGAAGATCGAAGCCGTGGTGGAAGACGGCGCGAGCGAGAACCCGGTGTTCGCCGAGAAGGCCCGCAAGCTGCTGGAGCGCGACAAGGTGGCCGCCATCATCGGCTGCTACACATCGGCCTCGCGCAAGGCGCTGCTGCCGGTGCTCAACCAGGCCAAGGGGCTGCTTTTCTACCCGACCTACTACGAGGGCCAGGAGCAGGACAAGCGCGTGTTCTACCCCTCGCAGGAGGCCACGCAGTCGGTGATCGCGGCGGTCGAGTGGATGGCGCGCGAGAAGGGCAAGAGCTTCTTCCTGGTGGGCTCCGACTACATCTACCCGCGCACCTGCAACAAGATCGCCAAGCCCGCCATCGCCAAGGCCGGCGGCAAGGTGCTCGGCGAGGAATACGCGCCGCTGGGCCACACCGAGTTCTCGTCGATCATCAACAAGATCAAGGCCGCCAAGCCCGACTGCATCTACAGCACCGTGGTGGGCGGCTCCAACGTGGCCTTCTACAAGCAGCTGCGCGCGGCGGGCCTGGACGGCGCCAAGCAGGTGCTGCTGTCCACCGTGGTGTCGGAAAACGAGATCGACGGCATCGGCAAGGACAACGCCGCGGGCTACTACGCCTGCATGGGCTACTTCCAGAGCATCAAGTCGCCGGCCAACGAGAAGTTCGTGAAAGCCTTCAAGGCTAAGTACGGGCAGGACCGCGTGATCGGCGACCCGATGGAGGTGGCCTACAACAGCGTGTACCTGTGGAAGCTGGCGGTCGAAAAAGCCAAGTCCTTCGACGTCGACAAGGTCACGGCCGCCGCCGCGGGCGTCGAGATCGAGGCGCCCGAAGGCACGGTGCGCATACACGCCACCAACCACCACGTGTGGAAGAAGGTGCGCGTGGGCCGCGCGCGGCCCGACGGGCAGTTCGACATCGTGTGGGAATCGCCCCAGCTCGTCGAGCCCAACCCCTTCCCGAAGGTCTGA
PROTEIN sequence
Length: 398
MTNAFNRRQIVKTGGSMIVLGAAGGVAGIASAQDGNTVKLGLLHSLSGTIAIAEASLVDAEKLAIEEINAAGGVMGKKIEAVVEDGASENPVFAEKARKLLERDKVAAIIGCYTSASRKALLPVLNQAKGLLFYPTYYEGQEQDKRVFYPSQEATQSVIAAVEWMAREKGKSFFLVGSDYIYPRTCNKIAKPAIAKAGGKVLGEEYAPLGHTEFSSIINKIKAAKPDCIYSTVVGGSNVAFYKQLRAAGLDGAKQVLLSTVVSENEIDGIGKDNAAGYYACMGYFQSIKSPANEKFVKAFKAKYGQDRVIGDPMEVAYNSVYLWKLAVEKAKSFDVDKVTAAAAGVEIEAPEGTVRIHATNHHVWKKVRVGRARPDGQFDIVWESPQLVEPNPFPKV*