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cn_combo_scaffold_171_1

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(1..1599)

Top 3 Functional Annotations

Value Algorithm Source
GTP-binding protein TypA/BipA n=1 Tax=Variovorax paradoxus B4 RepID=T1XC47_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 533.0
  • Bit_score: 1050
  • Evalue 0.0
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:AGU49904.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 533.0
  • Bit_score: 1050
  • Evalue 0.0
typA; GTP-binding protein TypA/BipA similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 533.0
  • Bit_score: 1050
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAGTACCAAGCAAATTCGCAATATCGCCATCATTGCCCACGTGGACCATGGCAAGACCACCATGGTCGACCAACTGCTGCGCCAGTCGGGAACCTTCGCCGATCACGAGAAAGTGGTCGATACGGTGATGGACAACAACGCGATCGAAAAAGAACGCGGCATCACGATTCTGGCCAAGAACTGCGCCGTGACCTGGCAAGGCACGCACATCAACATCGTCGACACCCCGGGCCACGCGGACTTCGGCGGTGAAGTGGAACGCGCGCTGTCGATGGTCGACGGCGTGGTGCTGCTGATCGACGCCCAGGAAGGCCCGATGCCGCAGACGCGCTTCGTGACCAAGAAGGCGCTGGCCCTCGGCCTGAAGCCGATCCTGGTGGTGAACAAGGTCGACAAGCCCGGCGCCAACCCCGACAAGGTGGTCAACGCCGCCTTCGACCTGTTCGACAAGCTCGGCGCGACCGACGAGCAGCTCGACTTCCCGGTGGTGTACGCCTCGGGCATCAACGGCTGGTCGTCGCTGGAAGAAGGCGCGCCCGGTGAGCAGTGGGGCCCCGACATGTCGGCCCTCTTCGACACCATCCTGAAGCACGTGCCGTCGCAAAAGGGCGACCCCGCCGCGCCGCTGCAGCTGCAGATTTCCGCGCTCGACTTCTCGACCTTCGTCGGCCGCATCGGCGTGGGCCGCATCAGCCAGGGCACGCTCAAGCCCATGACGGACGTCGTGGTCATGGAAGGTCCGGACGGCAAGTCGATCAAGGGGCGCGTCAACCAGGTGCTGACGTTCCAGGGCCTGGACCGCGTGCAAGCCACCGAAGCCGGCCCCGGCGAAATCGTGCTGATCAACGGCATTGCAGACATCGGCATCGGCGTGACCATCACCGACCCGGCCAACCCGGCACCGCTGCCGATGCTGAAGGTCGACGAACCCACGCTGACGATGAACTTCTGCGTCAACACCAGCCCGCTGGCCGGCCGCGAAGGCAAGTTCGTCACCAGCCGCCAGATCTGGGACCGCCTGCAGAAGGAACTGCAGCACAACGTGGCCCTTCGCGTGAACGAGACCGACGAAGAAGGCATCTTCGAAGTCATGGGCCGCGGCGAACTGCACCTGACCATCCTGCTGGAAAACATGCGTCGCGAAGGCTATGAAATGGCCGTCTCGAAGCCGCGCGTGGTGTTCCGCACCGTCAACGGCGAAAAGCACGAGCCCATCGAGCTGGTGACCGCCGACATCGAAGACCAGCACCAGGGCGGCGTGATGCAGGCACTGGGCGAGCGCAAGGGCGAACTGGTCAACATGGAACCGGACGGCCGTGGCCGCGTGCGCCTGGAGTACCGCATTCCGGCGCGTGGCCTGATCGGCTTCACCAACGAATTCCTGAACCTGACGCGTGGCTCGGGCCTCATCAGCAACATCTTCGACAGCTACGAGCCGCACAAGGGCGACATCGGCGGCCGCAAGAACGGCGTGCTGATCTCGATGGACGACGGTGAAATCTTCACCTACGCCCTGGGCAAGCTCGACGACCGCGGCCGCATGTTCGTGCGCGCCAACGACCCGGTGTACGAAGGCATGATCGTCGGCATCCACAGC
PROTEIN sequence
Length: 533
MSTKQIRNIAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVTWQGTHINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVNKVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMSALFDTILKHVPSQKGDPAAPLQLQISALDFSTFVGRIGVGRISQGTLKPMTDVVVMEGPDGKSIKGRVNQVLTFQGLDRVQATEAGPGEIVLINGIADIGIGVTITDPANPAPLPMLKVDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETDEEGIFEVMGRGELHLTILLENMRREGYEMAVSKPRVVFRTVNGEKHEPIELVTADIEDQHQGGVMQALGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPHKGDIGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHS