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cn_combo_scaffold_171_2

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(1596..2561)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 321.0
  • Bit_score: 579
  • Evalue 2.30e-162
truB; tRNA pseudouridine synthase B (EC:5.4.99.25) similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 321.0
  • Bit_score: 563
  • Evalue 4.50e-158
tRNA pseudouridine synthase B n=1 Tax=Variovorax sp. CF313 RepID=J3CR71_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 321.0
  • Bit_score: 579
  • Evalue 1.60e-162

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGAACGCGCCACGCACACGGGTGCAGCGGCGCCCTGTGCATGGGGTGTTGTTGCTCGACAAGCCGCTGGGACTCTCCAGCAACCAGGCCTTGCAGAAGGCCAAGTGGTTGCTGCGCGCGGAAAAGGCGGGCCACACCGGCACGCTCGATCCGCTCGCGACGGGTGTCCTGCCGCTGTGCTTTGGCGCGGCCACCAAATTCAGCCAGCTCCATCTGGATGCTGACAAGACCTACGAGGCCACGGCCCGCCTGGGCGTGAAAACCGCCACCGGCGACGCCGAAGGCGATGTCATCGCCGAGCGGTCCGTGCAAGTGACGCCGGAAGACCTGGCGCGCGTCGAGGCGCAGTTCACCGGGCCGATCCGGCAGGTGCCGCCCATGCACAGCGCGCTCAAGAAAGACGGCAAGGCGCTGTACGAATATGCCCGCGAAGGCATCGAGATCGAGCGGGCGCCGCGCGACGTGGTGATCCACAAGCTGGCGATCGACACGGTCGGCGCCATCGGCGACAACGTCATCCGCATCCTTGCCACCGTGAGCAAGGGCACCTACATTCGCACCCTCGGCGAGGACATCGGCGAGGCGCTGGGTTGCGGCGCGCACCTGACATCGCTGCGCCGCGTTGCCACCGGCGATTTCGTCGAGGCGCAGTGCGTCACGCTCGAAGCCCTGGAGGCCATGGACGAAGACGAGCGTCTGGCGCGCCTCCTGCCCGCCGAGGCGCTGGTGGACGGCCACAGCCGCGTCACGCTGGGCGCGGAAGATGCTGCACGCTTTCTTTCGGGCCTGCGCCGCCGTGGCAGCTGGGTCGATGCGGGCGAGGTGGCCGTTTTCGGCGCCGAGCCGGCCGCCTTTCTCGGGACGGCCCATGTCACGGCCGGTGAACTGATTCCGGGGCGCTTGCTGAACCCCATCGAAATCCAGCAAATTCTTTTGAACGCACAACAGACCGAAGCGACACCATGA
PROTEIN sequence
Length: 322
MNAPRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLCFGAATKFSQLHLDADKTYEATARLGVKTATGDAEGDVIAERSVQVTPEDLARVEAQFTGPIRQVPPMHSALKKDGKALYEYAREGIEIERAPRDVVIHKLAIDTVGAIGDNVIRILATVSKGTYIRTLGEDIGEALGCGAHLTSLRRVATGDFVEAQCVTLEALEAMDEDERLARLLPAEALVDGHSRVTLGAEDAARFLSGLRRRGSWVDAGEVAVFGAEPAAFLGTAHVTAGELIPGRLLNPIEIQQILLNAQQTEATP*