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cn_combo_scaffold_171_3

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(2564..2935)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-binding factor A n=1 Tax=Variovorax paradoxus (strain S110) RepID=RBFA_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 241
  • Evalue 5.30e-61
rbfA; ribosome-binding factor A similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 241
  • Evalue 1.50e-61
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parad similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 241
  • Evalue 7.40e-61

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCGAAAAGAAAAGCCGCCGCCCCCAACCGCGCGTTCAAGGTCGCCGACCAGATCCAGCGGGATCTGACGGAGTTGATCGCGCGCGAGTTGAAGGACCCGCGCGTGGGCATGGTCACGATCCAGGCGGTCGAGGTGACGCCCGACTATGCGCATGCGAAGGTCTTCTTCAGCATGCTCACGGGCGACGTGACCGAGACCACCGAAGCGCTGAACCAGGCCGCGGGCTTCCTGCGCAACGGCCTGTTCAAGCGCCTGCATATCCACACCGTGCCCACGCTGCACTTCCTGTTCGACCGCACCACCGAGCGTGCGGCCGACATGAACGCGCTCATCGCGCAAGCAGTCGCTTCGCGCTCGAAAGACGACTAG
PROTEIN sequence
Length: 124
MPKRKAAAPNRAFKVADQIQRDLTELIARELKDPRVGMVTIQAVEVTPDYAHAKVFFSMLTGDVTETTEALNQAAGFLRNGLFKRLHIHTVPTLHFLFDRTTERAADMNALIAQAVASRSKDD*