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cn_combo_scaffold_171_4

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(2957..5938)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-2 n=1 Tax=Variovorax sp. CF313 RepID=J2KU98_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 996.0
  • Bit_score: 1803
  • Evalue 0.0
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 996.0
  • Bit_score: 1803
  • Evalue 0.0
translation initiation factor if-2 similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 994.0
  • Bit_score: 1780
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2982
ATGTCCAGTACCACTGTCGCCGAGTTCGCGAACGAGCTCAAGAAGACTCCCGAAACCCTGCTTGACCAGCTCAAGAGTGCAGGCGTGCCCAAGGCGGCCGCCACCGATGCGCTCACCGAGGCTGACAAGCAGCGCCTGCTCGGCCACCTCAAGGCCAGCCACGGCACCGTCGAGCCCGAGCGCAAGAAGATCACGCTGACCAAGAAGTCGACCAGCGAGATCAAGCAGGCCGACGCCACCGGCCGCGCCCGCACCATCCAGGTCGAGGTGCGCAAGAAGCGCACCTTCATCCAGCGCGAAGACGGCCATCCCGCGTCGCCCGAGGCTGCGCCGCAAGTGGCCGAGGCGCCCGCCGCGGCACCCGCCGCTCCGCGCGTCGACGAGGCCGAACTGGCCCGCCGCGAGGAAGAGGCACGCCGCCAGGCCGAGCTGATCCGCCGCCAGGAAGAAGAACTGGCCGAGAAGCGTCGCCTGCGCGAAGAAGCCGAAGCCCGCGAACGCGAACAGGCCGAGAAGGCCGAGCGCGCGGAACAGGCCGAGCAGGAAGCCGCGCGCGTCGCTGCCGAGAAGAAGGCCGCCGCCGAGGCAGCCGCTGCCGCAGCGGCCGCCAAGAACACGCCCGCCAAGCCGGCTGCGCCCGCACCCGCTCCCGCAGTGACGGCCGCGGCCGCCGCCGCCGAGCAGCAGGCCGCCGACACCAAGCTCGCCGCGCAGAACGCCGCCACGCAAGCCAAGGAAGACGCGAAGGCCAAGGCCGCCGCTGAATCGAAGGCCCGTGCCGACGAAGAAGCCGCGCGCGCCAAGGACCTCGACGAGCGTCGCCGCAAGGCCCTGGCCGAAGCCGAAGCCATTCGCGCCATGATGAACGCACCGGCCCGCGTGCTGGTGCCGCACAAGGCGCCCGAGAAGCCGCAGCCCGAAAAGGCCGCGGTCAAGGGCACGCTGCACAAGCCGGCCACGCCCGCGGCCCGCCCCGGCGCACCCGCTGCGCCCGGCGCTGCAGCCGCACCCGGCGCAGCCGCCGGTGCCGGCAAGGAAGTCAAGTCCGCCAAGCTCTCGTCGAGCTGGGCTGGCGATCCTGCCAAGAAGAAGGAAATCAAGACCCGCGGCGATGCCAGCGGCGGTGTCGGCCGGGGCAACTGGCGCGGAGGCCCGCGCGGCCGCCGCGGCAATGACCGCGGTGGTCACGACGAGCAGCACGCACCGGCCGCACCGGTCGAGGCACGCATTCTCGAGGTGCACGTGCCCGAAACCATCACGGTGGCCGAGCTCGCGCACAAGATGGCCGTCAAGGCGCAAGAGGTCATCAAGCAACTGATGAAGCTCGGCCAGATGGCGACCATCAACCAGTCGCTCGACCAGGACACAGCAATGATCCTGGTGGAGGAAATGGGCCACAACGCGGTGGTTGCCGCGCTGGACGACCCGGAAGCCTTCACCGACGAGGACGTGTCGGCGCAAACGGCGGAAGCCCTGCCGCGCGCACCGGTCGTGACCGTCATGGGTCACGTCGACCACGGCAAGACCTCGCTGCTGGACTACATCCGCCGCGCCAAGGTCGCCGCGGGCGAAGCCGGCGGCATCACGCAGCACATCGGTGCCTACCATGTGGAAACCGAACGCGGCATGGTGTCGTTCCTCGACACCCCGGGTCACGAGGCCTTCACGGCCATGCGTGCCCGCGGTGCGCAGGCCACCGACATCGTGATCCTGGTGGTGGCGGCCGACGACGGCGTCATGCCCCAGACCAAGGAAGCCATCAAGCACGCGAAGGCGGCGGGTGTGCCGATCGTGGTTGCCATCAACAAGGTGGACAAGCCCGACGCCAACCTGGACCGCGTGAAGCAGGAACTGGTCGCTGAAGAAGTCGTGCCCGAAGAGTACGGCGGCGACGTGCCGTTCGTGCCGGTGTCCGCCAAGACGGGCCAGGGCATCGACGACCTGCTCGAGCAGGTGCTGCTGCAGGCCGAGGTGCTGGAACTGAAGGCGCCGGTGGATGCCGCCGCCAAGGGCCTGGTCATCGAAGCCCAGCTCGACAAGGGCCGCGGCCCGGTCGCTACCGTGCTGGTGCAGTCCGGCACGCTCAAGACCGGCGACGTGGTGCTGGCCGGCTCGACCTATGGCCGCGTGCGCGCCATGCTGGACGAAGACGGCAAGGCGACCAAGGCCGCCGGCCCGTCGATCCCGGTCGAAATCCAGGGCCTGACCGAAGTGCCGCAAGCGGGCGACGAGTTCATGGTGATGAGCGACGAGCGCCGTGCGCGCGAAATCGCCACCTACCGTGCCGGCAAGTTCCGCAACACCAAGCTGGCGAAGGCGCAAGCCGCGAACCTGCAGAACATGTTCACCGACCTGTCGGCCGGCGAAGTGCAGACGCTGCGCATCATCATCAAGGCCGACGTGCAGGGCTCGCAGGAAGCACTGGCCCAGTCGCTGCTCAAGCTGGCGACCGACGAGGTCAAGGTGCAGGTGGTGTATGCCGGCGTGGGTGGTATCAGCGAAAGCGACATCAACCTGGCCATCGCCTCGAAGGCGGTCGTGATCGGCTTCAACGTGCGCGCCGATGCCGGTGCGCGCAAGCTGGCCGAGGGCAATGGCGTCCAGCTGAACTACTACAGCATCATTTACGACGCCGTGGACGAGATCAAGGTCGCGATGTCGGGCATGCTGGCGCCGGAGCGCCGCGAGGAAATCATCGGCTCGGCCGAGATCCGCACGGTGTTCGTGGCCTCGAAGATCGGTACGGTCGCAGGTTCGTACATCACCTCGGGCTCGGTCAACCGCAGTGCGCATTTCCGCCTGCTGCGCGACAACGTGGTGGTCTACACCGGCGAAGTCGATTCGATCAAGCGCATGAAGGACGATGTCCGCGAAGTCCGCGAAGGTTTTGAGTGCGGTATCAAGCTCAAGAACTACAACGACATCAAAGAGGGCGATCAGCTCGAATTCTTCGAGATCAAGGAAATCGCCCGGACGCTGTAA
PROTEIN sequence
Length: 994
MSSTTVAEFANELKKTPETLLDQLKSAGVPKAAATDALTEADKQRLLGHLKASHGTVEPERKKITLTKKSTSEIKQADATGRARTIQVEVRKKRTFIQREDGHPASPEAAPQVAEAPAAAPAAPRVDEAELARREEEARRQAELIRRQEEELAEKRRLREEAEAREREQAEKAERAEQAEQEAARVAAEKKAAAEAAAAAAAAKNTPAKPAAPAPAPAVTAAAAAAEQQAADTKLAAQNAATQAKEDAKAKAAAESKARADEEAARAKDLDERRRKALAEAEAIRAMMNAPARVLVPHKAPEKPQPEKAAVKGTLHKPATPAARPGAPAAPGAAAAPGAAAGAGKEVKSAKLSSSWAGDPAKKKEIKTRGDASGGVGRGNWRGGPRGRRGNDRGGHDEQHAPAAPVEARILEVHVPETITVAELAHKMAVKAQEVIKQLMKLGQMATINQSLDQDTAMILVEEMGHNAVVAALDDPEAFTDEDVSAQTAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGMVSFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKVDKPDANLDRVKQELVAEEVVPEEYGGDVPFVPVSAKTGQGIDDLLEQVLLQAEVLELKAPVDAAAKGLVIEAQLDKGRGPVATVLVQSGTLKTGDVVLAGSTYGRVRAMLDEDGKATKAAGPSIPVEIQGLTEVPQAGDEFMVMSDERRAREIATYRAGKFRNTKLAKAQAANLQNMFTDLSAGEVQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQVVYAGVGGISESDINLAIASKAVVIGFNVRADAGARKLAEGNGVQLNYYSIIYDAVDEIKVAMSGMLAPERREEIIGSAEIRTVFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVVYTGEVDSIKRMKDDVREVREGFECGIKLKNYNDIKEGDQLEFFEIKEIARTL*