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cn_combo_scaffold_171_6

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(7472..8131)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4V3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 219.0
  • Bit_score: 401
  • Evalue 4.20e-109
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 219.0
  • Bit_score: 400
  • Evalue 3.40e-109
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; V similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 219.0
  • Bit_score: 400
  • Evalue 1.70e-108

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGGCATTGCAGCAAATAGTGGAACAAACCGTAGCCGGTCTGGGCTACGACCTGGTAGAGATCGAGCGCTCCGCCGGGGGATTGCTGCGCGTGACGATTGATTTGCCCTGGACGGCCCCCACCTCCGAAGCTGTGGCTGCCGGCTTGCCCGAGCCCTTCGTGACAGTGGAAGACTGCGAGAAGGTGACCCGCCAGCTGCAGTTCGCGCTGGAGGTCGATGGTGTCGATTACAAGCGGCTCGAGGTGTCCTCGCCGGGTATCGACCGTCCGCTGCGCAATGAGCAGGATTTTGAGCGTTTCGTGGGCGAGGTGATCGACATCACGCTCAAGGCCCCCATGGGCGCCGCCGCGGCGGGCCAGGTGTCGGCCAACCGCAAGAAGTTTCGCGGCACGCTGGAGCGTGCCGCAGCGCCCGAAGGGGCCGAGGGGGCTGACGCAGCCCCGGGCGGCTGGCAAATCGTCTGGAGCGATGCGCCGGAGCCCAAGCCGGGTCAAAAAGTGAGCAAGAAGCGCGCGCCTGCACCGTTGCATGCGCTGGGCTTCGTGCTGGACGAGCTGCGCGAGGCGCGGCTCGCGCCAATTGTGGATTTCAAGGGCCGCAAGGCCAAAACCCAACCGGGTTTTTCGGATATTGACGACGGAACGCAAGTTCCGGAATGA
PROTEIN sequence
Length: 220
VALQQIVEQTVAGLGYDLVEIERSAGGLLRVTIDLPWTAPTSEAVAAGLPEPFVTVEDCEKVTRQLQFALEVDGVDYKRLEVSSPGIDRPLRNEQDFERFVGEVIDITLKAPMGAAAAGQVSANRKKFRGTLERAAAPEGAEGADAAPGGWQIVWSDAPEPKPGQKVSKKRAPAPLHALGFVLDELREARLAPIVDFKGRKAKTQPGFSDIDDGTQVPE*