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cn_combo_scaffold_171_8

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9534..11174)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type uncharacterized transport system, duplicated ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2TE86_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 543.0
  • Bit_score: 968
  • Evalue 3.60e-279
ABC-type uncharacterized transport system, duplicated ATPase component {ECO:0000313|EMBL:EJL76577.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 543.0
  • Bit_score: 968
  • Evalue 5.10e-279
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 542.0
  • Bit_score: 936
  • Evalue 2.50e-270

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGAGCGACAACAACAATAAAACCGGCCAACCCCTGATCGACGTGAAGGGCCTGCGCGTCGCGTTCGGCGGCAAGGAGGTGGTGCACGGCATCGACTTCCAGATTGCCGCCGGTGAAAAGCTGGCGTTGGTCGGCGAGTCGGGGTCGGGCAAGACGGTCACCGCGCTCTCGCTGTTGCGGCTGGTGCAGAACGCCGACGTGACGGGCGAGGCCCGGCTTTACGGCGCGGAGCGCCAGCAGGCGCCGCGCGATCTGCTGTCGATTCCTGAGCGCGAACTGCGCGGCATCCGCGGCAAGGAGATCGCGATGATCTTCCAGGAGCCGATGACCGCGCTCAACGCGCTCTACAGCGTGGGCGACCAGATCGCCGAGGTGCTGGAGTTGCATGAGGCCCTGTCGGCGCGCGCCGCACAGGCCGCCGCCGTGCAACTGCTGGCCGACACCGGCATTCCCGAACCGGCGCGGCGGGCGAGGGCGTTTCCCCACCAGCTTTCGGGCGGCCAGCGCCAGCGCGCGATGATCGCGATGGCGCTCGCCTGCAAGCCGCGCCTGCTGCTGGCGGACGAGCCGACGACGGCGCTCGATGTCACGGTGCGCGCGCAGATCCTGGATCTGCTGGCCGACCTGCAGCACAAGTACGGCATGGCCGTGCTGCTGATCACACACGACCTGAACCTGGTGCGCCGCTTCGCGGACCGTGTGGTCGTCATGGAAAACGGCCATGTCGTCGAGCACGGCGCCGTGGCGCCGGTGTTCGATGCGCCGCAGCACCCCTACACCCGCAAGCTGATCGACAGCCATCCGACGCGCGACGTCGCCGCCGTGCAGGCCAGTCCCGCTGCCGTGCCGGTGCTGGAGGCCAAGGCGCTGCGCGTGATCTATCCGGTGCCGAAGCCCGGCATCGGTGGCTGGTTCCGAAAGGGCGAGTTCGTGGCAGTGCAGGGCGCGGACTTCCGTATCGTGCCGGGCGAGACGCTGGGAGTGGTCGGTGAATCGGGTTCGGGCAAGTCGACGCTTGCGCTGGCGGCACTGGGCCTGCTGAAGCATCAGGGCGCGCTGAAGATCGCCGGCAAGGACTGGGCGGTCGACCGTGCGTCCGACCTGGGGTTGCGACGGGTGATGCAGGTCGTGTTCCAGGACCCGTTCTCGTCGCTGTCGCCGCGCATGACGGTGGAGCAGATCGTGGGCGAGGGGCTAAGGGTGCATGCACCCGAACTCGGCGTCGAGGCGCGCCGCGCCCGCTCGCTCGCCGCGCTGGCCGACGTGGGGCTGACCGAATCGCAGTTTCCTTCGTTGCTCGACCGTTATCCGCATGAATTCTCGGGTGGACAGCGGCAGCGGCTGGCGATTGCGCGGGCGTTGATCGTCGATCCACAGCTGCTGGTGCTCGACGAGCCCACCAGTGCGCTCGACGTGACGATCCAGAAACAGGTGCTGGGCCTCCTGCAGAGACTGCAGCGCGAGCGGGGGCTGAGCTACCTGCTGATCACTCACGACGTGGAAGTGATCCGGGCCATGGCCCACCAGGTGATCGTGATGAAGGACGGCGCCATTCTCGAAACCGGGCCGGTCGAGCGCGTGCTCGGTGCGCCCGAGCATCCCTATACAAAAAAACTGGTGGCCGCGGCGCTGCTGGAATAA
PROTEIN sequence
Length: 547
MSDNNNKTGQPLIDVKGLRVAFGGKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADVTGEARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEVLELHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLLLADEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEHGAVAPVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVIYPVPKPGIGGWFRKGEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLKHQGALKIAGKDWAVDRASDLGLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSLAALADVGLTESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLLQRLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVLGAPEHPYTKKLVAAALLE*