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cn_combo_scaffold_171_10

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(12362..13402)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type uncharacterized transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J3CQQ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 346.0
  • Bit_score: 674
  • Evalue 6.80e-191
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:EJL76579.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 346.0
  • Bit_score: 672
  • Evalue 2.80e-190
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 346.0
  • Bit_score: 663
  • Evalue 4.50e-188

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
GTGCTCTCTTATGTCCTCAAGCGATTGCTGTTGTTCATTCCGACATTGCTCGGCGTTCTGCTCGTCACTTTTCTCGTCATTCAATTCGTGCCCGGCGGCCCGGTCGAGCAGTACCTGGCCGAGGCCAAGACGGCGGGCCGCGGCGGCGGAGGTGGCGGTTTCGAATCGGGCGGCGGCAGCTACCGGGGCAACCAGGGGGTGGACCCCAAGCGCCTGGAGCAGATCAAGGCCCTCTACGGCTTCGACAAACCGCCGCACGAGCGCCTTTGGCAGATGCTCGGGCAGTTCGCGCGCTTCGACCTCGGCAAGAGCTTCTTCCAGAACAAGGATGTCTGGACGCTGATCCTCGAGAAGCTGCCGGTGTCCATCAGCCTGGGTTTGTGGACTTTCTTCATCAGCTACGGAGTGGCCGTGCCCCTGGGCGTTGCCAAGGCGGTGAGGGCGGGCACGCGCTTCGACCTGATCAGCACGCTGATCGTGCTGATCGGCTATGCCATTCCGGGCTTCGTGCTGGGGGTGGCGCTGCTGGTGGTCTTCGGCGGGCAACTGCAGTGGTTTCCGCTGCGTGGGCTGACCTCCGCCAACTGGGACGACCTGAGCTGGGGCGCGCGCATCGTCGACTACCTGTGGCACATCACGCTGCCGGTGACGGCCATGGTGCTCGGCAGCTTCGCGGTGACGGCGATGCTCACCAAGAACGCATTTCTCGAGGAAATCCGCAAGCAGTACGTGCTGACCGCGCGGGCCAAGGGGCTGGGCGAGCGGCAGGTGCTGTGGAAGCACGTGTTCCGCAATGCGCTGATTCCGATCATCACGGGCCTGCCGTCGGCCTTCATCGGCGCCTTCTTCGCGGGCTCGCTGCTTATCGAGACCCTGTTCTCGCTCGACGGGCTGGGTCTGCTGGGCTACGAGAGCGTGATCCGCCGCGACTATCCGGTGGTGCTGGGCACGCTGTACCTCTTCACGCTGATCGGCTTGGTGACGAAGCTGATTTCCGATCTCTGCTACGTATGGGTGGACCCGCGTGTCAAATTCGAATGA
PROTEIN sequence
Length: 347
VLSYVLKRLLLFIPTLLGVLLVTFLVIQFVPGGPVEQYLAEAKTAGRGGGGGGFESGGGSYRGNQGVDPKRLEQIKALYGFDKPPHERLWQMLGQFARFDLGKSFFQNKDVWTLILEKLPVSISLGLWTFFISYGVAVPLGVAKAVRAGTRFDLISTLIVLIGYAIPGFVLGVALLVVFGGQLQWFPLRGLTSANWDDLSWGARIVDYLWHITLPVTAMVLGSFAVTAMLTKNAFLEEIRKQYVLTARAKGLGERQVLWKHVFRNALIPIITGLPSAFIGAFFAGSLLIETLFSLDGLGLLGYESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRVKFE*