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cn_combo_scaffold_171_21

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(23905..24345)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, chi subunit n=1 Tax=Variovorax sp. CF313 RepID=J2K8M9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 146.0
  • Bit_score: 282
  • Evalue 3.20e-73
DNA polymerase III, chi subunit {ECO:0000313|EMBL:EJL76590.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 146.0
  • Bit_score: 280
  • Evalue 1.30e-72
DNA polymerase iii chi subunit holc similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 146.0
  • Bit_score: 276
  • Evalue 5.00e-72

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
GTGACGGAAATCGGTTTTCACTACAACGCGCCGGACAAGCTGAACTACGCCTGCCGGCTGGTTCGAAAGGCCGTCAATGCGCGCGGCCTGCGCGTGGTGGTGATCGGCGACGCGCGCGCGCTCGACGTGGTGGATGCCGCGCTCTGGCAGCTTTCGCCGGTGGACTTCGTCGCGCATTGCCGTGGCGATGCGCCGCCTCATGTGCTTGCGCGTACGCCCGTCATTCTTTCTTCCGACGGTGCGGACGCGGCCGCGCTGCCGCACCGCGAGATGCTGGTGAACCTCGGGCTCGAGGTGCCGGCCGGCTTCGAGCGCTACGAGCGTCTCATCGACATCGTGAGCGACGAAAGCAACGACCGTCAGGTCGGCCGTTCGCGCTGGCGTCACTACGCCGACCGCGGCTACACCATCCAGCCGCACGACTTCGCAAAGAGTTCCTGA
PROTEIN sequence
Length: 147
VTEIGFHYNAPDKLNYACRLVRKAVNARGLRVVVIGDARALDVVDAALWQLSPVDFVAHCRGDAPPHVLARTPVILSSDGADAAALPHREMLVNLGLEVPAGFERYERLIDIVSDESNDRQVGRSRWRHYADRGYTIQPHDFAKSS*