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cn_combo_scaffold_171_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 25863..26984

Top 3 Functional Annotations

Value Algorithm Source
YjgP/YjgQ family permease n=1 Tax=Variovorax paradoxus RepID=UPI000374C2F8 similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 376.0
  • Bit_score: 681
  • Evalue 3.50e-193
Putative permease {ECO:0000313|EMBL:EJL76592.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 374.0
  • Bit_score: 673
  • Evalue 2.30e-190
permease YjgP/YjgQ family protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 379.0
  • Bit_score: 601
  • Evalue 2.20e-169

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGTTATTCCATTCTTCCCTACGCAAGGAGCTGTCCCGCAGCTTCGGAGCGACCCTCGTGGTTCTGGTCACCATCGTGATGACCATGATGCTCATCCGTACCCTCGGGCTCGCGTCCAAGGGCAGTGTGAACCCGCAGGAGGTGTTCCTGGTCATGGCCTACACGGTGCTAGGCTACATGCCGACCATCCTGAGCCTGAGCCTGTTCATCGCCATCGTCGGGACGCTCTCGCGCATGTACCGCGACAGCGAAATGGTCATCTGGTTCTCCAGCGGCCGCGGCCTCATGGACTTCGTGAAGCCCCTGTTTCGCTTCGCCTGGCCGGTGCTGATCCTGATCGCGGTGATGGCGCTGGTCGGCTGGCCGTGGGCCAACTCGCAGACCATCGGCATGCGCAAGCAGTACGAGCAGCGCAGCGACATCGAGCGCGTGGCGCCCGGCGAATTCCGCGAATCCGCGGGCCGCGTGCGGGTGTTCTTCATCGACAAGGAGACGCCTGACAACTCCAAGGCCACCAACGTCTTCATCTGGTCGGTCGAGCGCAACATGCAGATCACCACCTCGGCGCGCAGCGGCAGCATCGAGAACATCGGCGACTCCCGCTACCTGCTGCTCAACAACGGCCAGCGGCTGGAGCAGCCGATGGCCAACACCGGCCTGAAGATCAGCGAATTCAAGACCTACGGCACCCGCGCCGGCGGCAGCGACGGCCTCACGAACGACGCCACGCCGTCGCGCGCACGCACCACGCTTTCGCTGCTGACCGACCCGAGCGACATGAGCCGGGGCGAGCTGGCCTGGCGCATCGGCATGCTGCTGACCGCCGTCAACTTCGTGCTGCTGGCGCTGAACGTCTCCAGCGCCAACCCCCGCGTCGGCCGCAGCGGCAACCTGCTGCTGGCGCTGTTCGCCTTCGTCGTCTACTACAACATGCTCAACCTGGGCCAGAGCTGGATCAGCTCGGGCCGCTTCAGCATGGGCGGCTTCATGCTGCTGCTGCACGGCGGCGTGCTCGCGATCAACCTCGCGTGGCTGACCGCGCGCCAGAACAACTGGGGCCGCCGCGCCAGAAAAGTCCGCGCCGCCGCGCCGACCATTGCCAAGATCGAACCCACCACGTGA
PROTEIN sequence
Length: 374
MLFHSSLRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPQEVFLVMAYTVLGYMPTILSLSLFIAIVGTLSRMYRDSEMVIWFSSGRGLMDFVKPLFRFAWPVLILIAVMALVGWPWANSQTIGMRKQYEQRSDIERVAPGEFRESAGRVRVFFIDKETPDNSKATNVFIWSVERNMQITTSARSGSIENIGDSRYLLLNNGQRLEQPMANTGLKISEFKTYGTRAGGSDGLTNDATPSRARTTLSLLTDPSDMSRGELAWRIGMLLTAVNFVLLALNVSSANPRVGRSGNLLLALFAFVVYYNMLNLGQSWISSGRFSMGGFMLLLHGGVLAINLAWLTARQNNWGRRARKVRAAAPTIAKIEPTT*