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cn_combo_scaffold_180_1

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(1..861)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V324_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 287.0
  • Bit_score: 541
  • Evalue 5.70e-151
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 287.0
  • Bit_score: 541
  • Evalue 1.60e-151
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU39163.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 287.0
  • Bit_score: 541
  • Evalue 8.10e-151

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGAGTCTGTTTCTATTCAAGCGCCTCGCCACGCTGATCGGCACGCTGATCGGCGCCTCGGTCATCGTTTTCCTCGTCCTCGAGATCCTGCCCGGCAACGCCGCGCAGATGCTCATGGGACCCGACGCCTCGCCCGAAGCTGTCGCCGCCCTCGCCACAAAACTCGGCCTCGACCAGCCCGCGTGGACGCGCTATTGGCACTGGATCGGCGGCCTGCTGACCGGAAACCTCGGCGACAGCTACGCCTACAGCTCGCCGGTGCTCGACCTGATCCTCGAGCGCCTGGCGCTCACCATGCCGCTGGCCCTGCTGGCGATGTTCTTCACCACGGTCATCGCACTGCTGGTGGGCGTGACCGCCGCCGCGCGCCACAACAAGCTGGGCGACGTCGGGCTGATGGGCATGGCCCAGGTTGGTATCGCGATTCCCAATTTCTGGTTCGCGATCCTGCTGATCCTCGTGTTCTCGGTGAAGCTGCAGTGGTTCTCCGCCGGCGGCTTCGAGGGCTGGGGCGACGGCTTCTTCTCGGGCATCAAGTCGCTGTTGCTGCCTGCCCTGTCTCTTGCGGTGGTGCAAGCCGCGATCCTCGCGCGCATCACGCGCTCGGCCGTGCTGGAAGTGATGCGCGAAGACTTCGTGCGCACCGCGCGCGCCAAGGGCGTGTCTCAGCGCATGGTGCTGTGGACCCATGTGCTGCGCAACGCCATGATCCCGGTCATCACCGTCATGGGCATGCAGTTCTCCGAGCTGCTGGCCGGCACCATCGTGGTGGAGAACGTGTTCTATCTTCCCGGCCTCGGCCGGCTGATCTTCCAGGCCATCAGCAACCGCGACCTGATCGTGGTGCGCAACTGCGTGATG
PROTEIN sequence
Length: 287
MSLFLFKRLATLIGTLIGASVIVFLVLEILPGNAAQMLMGPDASPEAVAALATKLGLDQPAWTRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTAAARHNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFSGIKSLLLPALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVITVMGMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVM