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cn_combo_scaffold_180_6

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(3253..4227)

Top 3 Functional Annotations

Value Algorithm Source
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 324.0
  • Bit_score: 624
  • Evalue 6.30e-176
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 324.0
  • Bit_score: 621
  • Evalue 1.10e-175
ribose-phosphate pyrophosphokinase n=1 Tax=Variovorax paradoxus RepID=UPI0003723520 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 324.0
  • Bit_score: 628
  • Evalue 3.10e-177

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGCAGGCTAATCACCCTGATTTCATGGTTTTCACCGGCAACGCCAATCCTGGCCTTGCCGCGGAAATCGCGCACAACCTCGGCACTTCGCTGGGCGCTGCCCGCGTAGGCCGCTTCTCGGACGGTGAAGTCACCGTCGAGATCAACCAGAACGTCCGTGCCCGCGACGTGTTCGTGGTGCAGTCGACCTGCGCCCCGACCAACGAAAACCTGATGGAACTGCTGATCATGGTCGACGCGCTCAAGCGCGCATCGGCCGAACGGATCAGCGCCGTGATTCCCTACTTCGGCTATGCCCGCCAGGACCGCCGCCCGCGCTCGAGCCGCGTGCCGATCTCGGCCAAGGTCGTGGCCAACCTGCTGGAAACCGTCGGCGTCGAGCGCGTGCTCACGATGGACCTGCACGCCGACCAGATCCAGGGCTTCTTCGACATTCCGGTCGACAACATCTACGCCTCGCCGGTGCTGCTCGGCGACCTGCGCGCCAAGAACTACGAAGACCTGATTGTGGTCTCGCCCGACGTCGGCGGCGTGGTCCGTGCCCGCGCGCTGGCCAAGCAACTGAACTGCGACCTCGCCATCATCGACAAGCGCCGCCCGAAGGCCAATGTCAGCGAAGTCATGAACGTGATCGGCGAGATCGACGGCCGCAACTGCGTGATCATGGACGACATGATCGACACCGCCGGCACGCTGGTCAAAGCAGCCGAAGTGCTGAAAGAGCGCGGCGCCAAGAGCGTCTACGCCTACTGCACGCACCCGATCTTCTCGGGCCCGGCCATCGAGCGCATCACGCAGGGTTCGGCCCTCGACGAAGTGGTCGTGACCAACACCATTCCCCTTTCCGACGGCGCCAATGCCTGCGGAAAGATCCGCCAGCTCTCCGTGGCACCGCTGATCGCCGAAACGATCCAGCGCATTGCCAAGGGCGAGTCGGTGATGAGTTTGTTCTCGGATCAGGACAACCTGTTCTGA
PROTEIN sequence
Length: 325
MQANHPDFMVFTGNANPGLAAEIAHNLGTSLGAARVGRFSDGEVTVEINQNVRARDVFVVQSTCAPTNENLMELLIMVDALKRASAERISAVIPYFGYARQDRRPRSSRVPISAKVVANLLETVGVERVLTMDLHADQIQGFFDIPVDNIYASPVLLGDLRAKNYEDLIVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVSEVMNVIGEIDGRNCVIMDDMIDTAGTLVKAAEVLKERGAKSVYAYCTHPIFSGPAIERITQGSALDEVVVTNTIPLSDGANACGKIRQLSVAPLIAETIQRIAKGESVMSLFSDQDNLF*