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cn_combo_scaffold_180_16

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 15328..16335

Top 3 Functional Annotations

Value Algorithm Source
Heat-inducible transcription repressor hrcA n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V269_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 335.0
  • Bit_score: 620
  • Evalue 8.70e-175
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 335.0
  • Bit_score: 622
  • Evalue 3.20e-175
heat-inducible transcription repressor hrca similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 335.0
  • Bit_score: 620
  • Evalue 2.50e-175

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGCTGGACGACCGTGCCAAGTTGCTGCTCAAGACGCTCGTCGAGCGCTACATCGCCGACGGGCAACCCGTCGGCTCCCGCACGCTCTCGCGTTCTTCCGGGCTGGATTTGTCGCCCGCGACCATCCGCAACGTGATGTCCGACCTCGAGGCGCTGGGGCTGATCGCCAGTCCGCACACCTCGGCCGGGCGTATTCCCACGCACCGCGGCTACCGGCTTTTCGTCGACACCATGCTCACCGCCCAGCGCGAGCAGATGAGCCCGCCGGCGCTCGCGCCCGACCAGCCGCAGAAGGTGATCGCCAACGCGGCGCACCTGCTGTCGAACCTGTCGCAGTTCGTGGGCGTGGTGATGGCGCCGCGCCGGGCCTCGGTGTTCAAGCAGATCGAGTTCTTGCGGCTGTCCGACCGGCGCCTGCTGGTGATCATCGTGTCGCCCGACGGCGACGTGCAGAACCGGGTGATCTTTCCGGAGGCCGACTACTCGCAGTCGCAACTGGTCGAGGCCTCCAACTACATCAATGCGAACTACGCGGGCCTCACGATCGAGCAGGTGCGCGACCGCCTGCAGTCCGAAGTCGAGAAGCTGCGCGGCGAAATCGCGGCGCTGATGCAGGCCGCCGTTCAGGTCAGCTCCGAGGTGCTCACGGAGGCGCAGGAAGACGAAGTCGTGATTTCCGGCGAGCGCAACCTGCTCGCCGTGACCGATTTTTCCAGCGACATGGGCCAACTGCGCCGCGCTTTCGAGCTTTTCGAGCAGAAGGCGCAGCTGATGCGGCTGCTGGACGTGTCGAGCAAGGCGGAGGGCGTGCGCATCTTCATCGGCGGCGAAAGCCAGGTGGTGCCGTTCGAAGAACTGTCCATCGTCAGCGCCAACTACGAGGTCGACGGGCAGGTCGTGGGCACGCTGGGCGTGATCGGGCCGACCCGCATGCCCTACGAACGCATGATCCAGATCGTCGACATCACGTCGCGTCTCGTGAGCAATGCGTTGAGCCATCGCAAATAA
PROTEIN sequence
Length: 336
MLDDRAKLLLKTLVERYIADGQPVGSRTLSRSSGLDLSPATIRNVMSDLEALGLIASPHTSAGRIPTHRGYRLFVDTMLTAQREQMSPPALAPDQPQKVIANAAHLLSNLSQFVGVVMAPRRASVFKQIEFLRLSDRRLLVIIVSPDGDVQNRVIFPEADYSQSQLVEASNYINANYAGLTIEQVRDRLQSEVEKLRGEIAALMQAAVQVSSEVLTEAQEDEVVISGERNLLAVTDFSSDMGQLRRAFELFEQKAQLMRLLDVSSKAEGVRIFIGGESQVVPFEELSIVSANYEVDGQVVGTLGVIGPTRMPYERMIQIVDITSRLVSNALSHRK*