ggKbase home page

cn_combo_scaffold_180_20

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(20740..21555)

Top 3 Functional Annotations

Value Algorithm Source
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.3.39) similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 271.0
  • Bit_score: 458
  • Evalue 1.70e-126
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase HpcH {ECO:0000313|EMBL:AGU49187.1}; EC=4.1.2.52 {ECO:0000313|EMBL:AGU49187.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 271.0
  • Bit_score: 458
  • Evalue 8.50e-126
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase HpcH n=1 Tax=Variovorax paradoxus B4 RepID=T1X8D5_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 271.0
  • Bit_score: 458
  • Evalue 6.00e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGCCCGCCCAAAACGCTTTCAAGGCGGCCCTGGCCGCGCGCCGGCCGCAAGTCGGCCTCTGGCTGTCGATGGCCAACCCGTACATGGCCGAGGTCAGCGCGACCACCGGCTTCCAGTGGCTGCTGATCGACGGCGAGCACGCGCCCAACGACCTGCGCTCCACGCTCGCCGCGCTGCAGGCGGTGGCGCCGCATCCGGTGCAGCCGGTGGTGCGCGCGGTGCAGGGCGACACGGCGCTCATCAAGCAGCTGCTCGACATCGGCGCCCGCAACCTGCTGGTGCCGATGGTCGACACGGCCGAGCAGGCGCGCGCGCTGGTGTCCGCCACGCGCTACCCGCCCCAGGGCATTCGCGGCGTGGGCAGCGCGGTGGGACGCGCATCGCAATGGAGCGCCCGCACCGACTACCTCGACATCGCGGACGACGAAGTCTGCCTGCTGGTGCAGGCCGAGACCACCACGGCGCTCGCCAATCTCGAGCGGATCTGCGAAGTGGAAGGCGTGGACGGCGTCTTCATCGGCCCGGCCGATCTCGCGGCGTCGATAGGCCATCGCGGACGGCCCGGCCACCCCGAAGTGCAGGCCGCGATCGAAGCCGCCATGCGGACCATCGTGGCATCGGGCAAGGCGGCCGGCACGCTCACCTCCGACCCGAAGCTGGCGAAGCGCTACCTGGAGCTGGGCTGCACTTTCGTTGCCGTCGGCGTCGACGTGCTGCTGTACGCGAATGCCGCGCGCAAGCTGGCGGCCGACTTTCTCGGGTCGCCCGCAACGGGTGCGCAGGCCGTGGCACCGGAGTCGCGCGGCGCCTACTGA
PROTEIN sequence
Length: 272
MPAQNAFKAALAARRPQVGLWLSMANPYMAEVSATTGFQWLLIDGEHAPNDLRSTLAALQAVAPHPVQPVVRAVQGDTALIKQLLDIGARNLLVPMVDTAEQARALVSATRYPPQGIRGVGSAVGRASQWSARTDYLDIADDEVCLLVQAETTTALANLERICEVEGVDGVFIGPADLAASIGHRGRPGHPEVQAAIEAAMRTIVASGKAAGTLTSDPKLAKRYLELGCTFVAVGVDVLLYANAARKLAADFLGSPATGAQAVAPESRGAY*