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cn_combo_scaffold_180_22

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(23078..24601)

Top 3 Functional Annotations

Value Algorithm Source
altronate dehydratase (EC:4.2.1.7 4.2.1.42) similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 507.0
  • Bit_score: 957
  • Evalue 1.30e-276
Altronate dehydratase {ECO:0000313|EMBL:AGU49189.1}; EC=4.2.1.42 {ECO:0000313|EMBL:AGU49189.1};; EC=4.2.1.7 {ECO:0000313|EMBL:AGU49189.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteob similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 507.0
  • Bit_score: 957
  • Evalue 6.40e-276
galactarate dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI00035E7FD7 similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 507.0
  • Bit_score: 960
  • Evalue 7.00e-277

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGAACGACAGCCCCCTGCTTCGCCTGCACCCGCACGACAACGTGCTGGTGGCCAAGACCCCCATTGCGCTCGGCGAGACCATCGAGGAATTCGGCGTCCGCGCCCGCGCGCAGATTCCCGCGGGCCACAAGATCGCAGCGTGCGCCATCGCGGCCGGCGAGCAGGTGAAGAAGTACGACACGGTGATCGGCGTGGCCTCGCGCGACCTGCAGCCGGGCGACTACGTGCACAGCCACAACCTCACGCTGGTCGACAGCTACCGCGACCCGGCCTTCTGCCAGGACGTGCGCCCCGTGGCCTACGTGCCCGAGGCCGAGCGGGCCGGCTTCATGGGCTTCGTGCGGGCCGACGGGCAAGTGGGCACGCGCAACTTCATCGGCATCCTGTCGTCGGTCAATTGCTCGTCCACGGTCATCCAGCGCATCGCGGCGCATTTCACCGCCGAGCGCCTCGCGGCGTTTCCCAACGTGGACGGCGTGGCCGCCTTCGCGCAGACCAGCGGCTGCGGCATGTCGTCGCCCAGCGAGCATTTCGACGTGCTGCGCCGCACCCTCGCAGGCTACGCCCGCCATCCGAACCTGGCGGGCGTGCTGATCGTGGGCCTGGGCTGCGAGCGCAACCAGGTCGATGCGCTGGTCGACTCGCAGGGCCTGCAGCAGGGCCGCCTGATGCGCACGCTGGTGATGCAGGAAGTGGGCGGCACGCGCCAGACCATCGAGGCCGGCATTCGCGCGATCGAGGACATGCTGCCCGAGGCCGACGCGGCGCGGCGCACGCCGGTGGGCGCCAACCATCTCAAGATCGGCCTGGAGTGCGGCGGCTCCGACGGCTTCTCCGCCATCACGGCCAACCCTGCCCTGGGCGCGGCCATGGACCTGCTGGTGCGCCACGGCGGCACGGCCATCCTGTCGGAGACGCCCGAGATCCACGGCGTGGAGTTCATGCTGACGCGGCGCGCCATCAGCCCCGAGGTCGGGCAGAAGCTGCTGGACCGGCTGGCCTGGTGGGAGCGCTACGCGGCCGGCCAGAACGCGCAGTTCAACGGCGTGGTCGGCCACGGCAACCAGGCCGGCGGCCTTGCCAACATCTTCGAGAAGTCGCTGGGCTCGGCCATGAAGGGCGGCACCACGCCGCTGCGCGCGGTGTACGAATACGCGGAGCCCATCGACCAGCCGGGCTTCGTCTTCATGGACTCGCCGGGCTACGACCCGGTGGCGGTCACCGGCCAGATCGCGAGCGGCGCGCAGCTGATCTGCTTCACCACGGGCCGCGGCTCGATGTTCGGCAGCAAGCCCGCGCCGACCATCAAGCTCGCGAGCAATACGCCGATGTTCCGGCGCCTGGAAGAAGACATGGACATCAACTGCGGCGTGGTGATCGACGGCGAGCTGACGGTCCCCGAACTGGGCCAGCGCATCTTCGAGCAGATCCTTCGGCATGCCTCCGGCGAGCCCACCAAGAGCGAGACCCTCGGCCTCGGCGACCACGAGTTCGTGCCGTGGCACCTGGGCATCGTGAGCTGA
PROTEIN sequence
Length: 508
MNDSPLLRLHPHDNVLVAKTPIALGETIEEFGVRARAQIPAGHKIAACAIAAGEQVKKYDTVIGVASRDLQPGDYVHSHNLTLVDSYRDPAFCQDVRPVAYVPEAERAGFMGFVRADGQVGTRNFIGILSSVNCSSTVIQRIAAHFTAERLAAFPNVDGVAAFAQTSGCGMSSPSEHFDVLRRTLAGYARHPNLAGVLIVGLGCERNQVDALVDSQGLQQGRLMRTLVMQEVGGTRQTIEAGIRAIEDMLPEADAARRTPVGANHLKIGLECGGSDGFSAITANPALGAAMDLLVRHGGTAILSETPEIHGVEFMLTRRAISPEVGQKLLDRLAWWERYAAGQNAQFNGVVGHGNQAGGLANIFEKSLGSAMKGGTTPLRAVYEYAEPIDQPGFVFMDSPGYDPVAVTGQIASGAQLICFTTGRGSMFGSKPAPTIKLASNTPMFRRLEEDMDINCGVVIDGELTVPELGQRIFEQILRHASGEPTKSETLGLGDHEFVPWHLGIVS*