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cn_combo_scaffold_180_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(24626..25624)

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extra cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XAK5_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 332.0
  • Bit_score: 584
  • Evalue 8.90e-164
putative Bug-like extra cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 332.0
  • Bit_score: 584
  • Evalue 2.50e-164
Putative Bug-like extra cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU49190.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 332.0
  • Bit_score: 584
  • Evalue 1.30e-163

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAAGATCATTCGCACAGTGGCGCGACGTCAGTTCGTGCTGGGCGGCCTCGGCGCCGCGACGCTTGCAGCCACGCCTCTTCGCGCGCTGGCCGCCTCGGACTATCCCAAGCGCCCTCTCACATTCATCTGCCCATGGCCCGCCGGCGGCACCGCCGACCGGTCGATGCGCATCATCTGCCAGATCGCCGCGCGCGAACTCGGCCAGCCCATCGCGTTGGAGAACCGCGCGGGCGCCTCGGGAATGATCGGCACCAAAGCGCTGGCTTCGGCGCGGCCCGACGGCTACACCATAGGGCAGATACCGATCTCGGTCACGCGCTTCTCGCAGATCGGCACGGTGCAGCTCGACCCCTTGAAAGACCTCACCTACCTCGCGCGCACCTCCGGCCAGACCTTCGGCATCGCCGTGCCTGCGCGCTCGCCGTTCAAGTCGCTGCAGGACATGGTGGCGCAGGCCAAGGCCCGCCCCGGCGTCATCAGCTATGGGCATGCCGGCGTCGGCGGCGCGACCCATGTGGGCATGGAACAGTTCGCGCAGGCCGCGGGCGTGAAGCTCAACGCCATCGCCTACAAGGGCGGATCGGCCGCGCTGCAGGACGTGCTGGGCGAGCAGCTCGACATGCTGGCCGACAGCAGCTCGTGGGCGCCGCATGTCGAAAGCGGCAAACTGCGCCTGCTCGCGACATGGGGAGAATCGCGCACGCCGCGTTTCAAGGACGCGCCTACGCTGAAGGAACTCGGCTACGACGTGGTGGTCGAGGCGCCCAACGGCATCGGCGCACCGCAAGGCCTGCCCGCCGATGTCGAGAAGCGGCTGCGCGATGCGTTCCGCATCGCCGTCAACAGCGAAGACTTCAAGAAGGTGGCCGAGAGCATCGACGCGCCGGTCATGTACCAGGACGGCCCCGACTATCAGAAATACGCGCAGTCCGTGTACCGCCAGGACACGGAGCTGATCCGCAAGCTCAACCTCAAGGAACTGATGGAAAAGGGCTGA
PROTEIN sequence
Length: 333
MKIIRTVARRQFVLGGLGAATLAATPLRALAASDYPKRPLTFICPWPAGGTADRSMRIICQIAARELGQPIALENRAGASGMIGTKALASARPDGYTIGQIPISVTRFSQIGTVQLDPLKDLTYLARTSGQTFGIAVPARSPFKSLQDMVAQAKARPGVISYGHAGVGGATHVGMEQFAQAAGVKLNAIAYKGGSAALQDVLGEQLDMLADSSSWAPHVESGKLRLLATWGESRTPRFKDAPTLKELGYDVVVEAPNGIGAPQGLPADVEKRLRDAFRIAVNSEDFKKVAESIDAPVMYQDGPDYQKYAQSVYRQDTELIRKLNLKELMEKG*