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cn_combo_scaffold_116_6

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(4878..5510)

Top 3 Functional Annotations

Value Algorithm Source
alpha/beta hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00037A70FA similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 210.0
  • Bit_score: 378
  • Evalue 4.70e-102
Variovorax paradoxus strain MEDvA23 contig_86, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21732.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 208.0
  • Bit_score: 375
  • Evalue 5.60e-101
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 208.0
  • Bit_score: 368
  • Evalue 1.80e-99

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAATTCCCAGACAGAAAAGATCACCCTCCAGGGCGCCGCCGGCCGCATCGAAGTGCAGCGCGACCAGCCCGCTGAAGCGCCGCGCGGCGTTGCCGTCATCGCCCATCCCCATCCGCTGTTCAGCGGCACCATGGACAACAAGGTGGTGCAGACGCTGGCGCGGGCTTTCGTCGCCAGCGGCTGGACCTCGGTGCGCTTCAATTTCCGCGGCGTGGGCGCCAGCGAAGGCGTGCATGACGAGGGGCGCGGCGAGCTGGAGGACATGCTGAATGTCGTCGGCCAACTGGCGCCCGAAGGGCCGTTGGCGATTGCCGGGTTCTCGTTCGGGGCCTTTGTCGCGAGTGGCGCCGTCTCCAGGCTGTGGGGCGAGCGCGACGTGCGGCAGATCGTGCTGGTCGGCACCGCCGCCGCGCGCAATGTCGTGGCTCCGTTGCCGGTCGAGGCGCGCGAGCGCGCGCTGGTCATTCACGGCGAGGCCGACGACACCGTGGCCTTGTCCGCCGTGATGGATTGGGCGCGGCCGCAGTCACTTCCTGTCACAGTCATCCCCGGGGGCGGCCATTTCTTTCACGGACAATTGCCGCTGCTCAAAAGTCTCGTTGCCCGCCATCTCCGCGCGGGCGCTGCGTGA
PROTEIN sequence
Length: 211
MNSQTEKITLQGAAGRIEVQRDQPAEAPRGVAVIAHPHPLFSGTMDNKVVQTLARAFVASGWTSVRFNFRGVGASEGVHDEGRGELEDMLNVVGQLAPEGPLAIAGFSFGAFVASGAVSRLWGERDVRQIVLVGTAAARNVVAPLPVEARERALVIHGEADDTVALSAVMDWARPQSLPVTVIPGGGHFFHGQLPLLKSLVARHLRAGAA*