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cn_combo_scaffold_116_8

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(5910..7067)

Top 3 Functional Annotations

Value Algorithm Source
Putative integral membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2L118_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 377.0
  • Bit_score: 682
  • Evalue 2.10e-193
Variovorax paradoxus strain MEDvA23 contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25360.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 371.0
  • Bit_score: 688
  • Evalue 7.20e-195
vanz family protein similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 369.0
  • Bit_score: 679
  • Evalue 5.10e-193

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGGTGGCCACGGTGGAGAAGCCGCACAAGTCCGCCGCGTTCCCCCTGGCGCTCGCCTATGCGGCGCTGATCGTCTACGCCAGCCTGTACCCGTTCGCCGACTGGCGCGACCAGGGCATCGTCCCGTGGGCCTACCTGTGGGCGCCCTGGCCCAAGTACTGGACGGGCTTCGACTTCGCGATCAACGTGGTGGGCTATGTGCCCTTCGGGTTCCTGTGCGCGCTGGCGGTGCTTCGCACGCGCCGCAGCGCCAGCGCATGGCGGGTGGTGTTGCGTGCCACGGTGGCTGGCGCGGCCATCGCCTTTTCCATGGAGACGCTGCAGAGTTATTTGCCGGTGCGCATTCCCTCGAATGTGGATCTGGCGCTGAACACGACCGGCACGATCATCGGCGCGGTGCTGGCTGCGGGGCTGGAACGACTCGGGGCCATTGCGCACTGGAGCCGCGCGCGGTCGCAGTGGTTCGTCGAAGAATCCCGTGGCGCACTGGTGCTGCTGGCGCTGTGGCCGTTTGCGCTGCTGTTCCCGGCGGCCGTGACCTTCGGGCTCGGACAGGTGTTCGAGCGGCTGGAGGTCGCGATCTCCGAGTGGCTGCTCGACACGCCTTTCATCGACTGGCTGCCGCTGCGCCAGTTCGAGCTCGAGCCGCTGGTGCCCGCCGTGGAGCTGCTGTGCGTGATGCTCGGGGCGCTGGTGCCGTGCCTGCTGGGCTATCTGGTGGCGCGCTCCGTGGTGCAGCGGGCGATCATGCTGCCGCTGATCCTGCTGGTGGGCGTGGCGGCTTCGGCGTTGTCGGCGGCCCTGAGCTACGGCCCGGCGCATGCTTGGGCGTGGCTTGATCTGCCAGTGCAGGTCGGCATGGCTGCGGCGCTCTTTGCCGGCATCCTGCTTCTGCTGGCGCCGCGCCGCCTGTGCGCGGCCCTGCTGCTGATGGGGCTGGTGCTGCAGCTGAGCCTGCTGAATCAAGCGCCCGAGAGCGCGTATTTTGCCCAGACCCTGGCCACATGGGAGCAGGGGCGTTTCATTCGCTTCCATGGACTGGCCCAGTGGCTGGGTTGGGTATGGCCCTTCGCCGTGCTGGCCTATGTGGTAGCGGCGCTGTCGCGGCGAGGGCGCGGCAGCGGCGATGGCGGCCCGGCCGCAGGGGGCGGTCACTAA
PROTEIN sequence
Length: 386
MVATVEKPHKSAAFPLALAYAALIVYASLYPFADWRDQGIVPWAYLWAPWPKYWTGFDFAINVVGYVPFGFLCALAVLRTRRSASAWRVVLRATVAGAAIAFSMETLQSYLPVRIPSNVDLALNTTGTIIGAVLAAGLERLGAIAHWSRARSQWFVEESRGALVLLALWPFALLFPAAVTFGLGQVFERLEVAISEWLLDTPFIDWLPLRQFELEPLVPAVELLCVMLGALVPCLLGYLVARSVVQRAIMLPLILLVGVAASALSAALSYGPAHAWAWLDLPVQVGMAAALFAGILLLLAPRRLCAALLLMGLVLQLSLLNQAPESAYFAQTLATWEQGRFIRFHGLAQWLGWVWPFAVLAYVVAALSRRGRGSGDGGPAAGGGH*