ggKbase home page

cn_combo_scaffold_116_14

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 11167..12075

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L123_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 301.0
  • Bit_score: 566
  • Evalue 1.30e-158
Transcriptional regulator {ECO:0000313|EMBL:EJL78968.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31 similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 301.0
  • Bit_score: 566
  • Evalue 1.90e-158
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 297.0
  • Bit_score: 540
  • Evalue 2.90e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGACAGTCTCGATCTGATCAGAACCTTCCGGGAAGTCGCCTCCCACGGCAGCTTTTCCCAGGCAGCCAAGAGGCTCGACATGTCGAAAGCCACCGTCAGCAAGTATGTGGCGGAGCTGGAAACCCGCTTCGGCGTGCGTCTTCTCAACCGCTCCACCCGCTCCGTGAGCCTCACCGACGCCGGCCAGCTGCTGCTCGACCGCAGCACCCCGATGCTCGAGATGGTCGAGCTCACCCAGTCGGAGCTGCAGGACCGCGCCAGCCAGCCCGGCGGGCGGCTGCGCATCTCGGCGCCGCACGGCATGGGCAGCGGCGAATTCCCGAACCTGCTGGCCGACTTCATGCGCTACTACCCCGACGTGACGATCAGCCTGCAGCTGACCAACCGCACCGTCGACCTGGCCGAGGAAGGCATCGACGTCGAGCTGCGCAGCGGCCCCGTGGAAGACGCCAACCTCATCGTGCGCAAGCTGCGGCTCATGAACATGGTGGTCTGCGCCTCGCCGGTCTACTGGAAGAAGCACGGCAAGCCCGAGCATCCGCGCGACCTCGCCAGCCACGATGCCCTGACGTTCTCGCTGCTGGGCCAGCAGCCGGTCTGGCGCTTCGACGACAACGGCACGCCGCTCGACGTGCCGGTGAAAAGCCGCATGGACTGCACCGAAGGCGCGCCGCTGATCCGCGTGGCCATGCACGGCTTCGGTGTGATCTACCTGCCGTCGATCCTGGTGCAGTCGCACCTGGACCAGGGCGAACTGGTGCCGGTGCTGCAGGGCTACGCCCGCAAGGACATGTGGCTCTCGGCCGCCTACCTGCAGCGGCGCCACAACAGCGCCGCGCTGCGCGCGCTGCTCGACTTCCTGCAGACCCGCGTCGGGCCCGGCAGCACGCCGCGCAAGAGCCATTGA
PROTEIN sequence
Length: 303
MDSLDLIRTFREVASHGSFSQAAKRLDMSKATVSKYVAELETRFGVRLLNRSTRSVSLTDAGQLLLDRSTPMLEMVELTQSELQDRASQPGGRLRISAPHGMGSGEFPNLLADFMRYYPDVTISLQLTNRTVDLAEEGIDVELRSGPVEDANLIVRKLRLMNMVVCASPVYWKKHGKPEHPRDLASHDALTFSLLGQQPVWRFDDNGTPLDVPVKSRMDCTEGAPLIRVAMHGFGVIYLPSILVQSHLDQGELVPVLQGYARKDMWLSAAYLQRRHNSAALRALLDFLQTRVGPGSTPRKSH*