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cn_combo_scaffold_116_19

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(14945..15418)

Top 3 Functional Annotations

Value Algorithm Source
thymocyte nuclear protein 1 n=1 Tax=Variovorax paradoxus RepID=UPI000378BCC1 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 152.0
  • Bit_score: 299
  • Evalue 2.10e-78
EVE domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 152.0
  • Bit_score: 297
  • Evalue 1.70e-78
Uncharacterized protein {ECO:0000313|EMBL:EJL78973.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313. similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 152.0
  • Bit_score: 297
  • Evalue 8.50e-78

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGCCCACCCATTCCCCCAATTTCTGGTTGATGAAATCCGAGCCCGACGAGGTCTCGATCGACGATGCGCTCGCCGCGCCCGGCGCCACCGTGGCGTGGACCGGCGTGCGCAACTATCAGGCACGCAACTTCATGCGCGACGGCATGAAGGTCGGCGACGGCGTGCTGTTCTATCACTCGAGCTGCCCGGAGCCGGGCATCGCCGGCATCGCGCGGGTGGCCTCGGGCATCAAGCCCGACCCGACGCAGTTCGACCCCAAGTCGCCCTACTACGACGCAGGCGCCAAGCCGGAAGATCCGCGCTGGCTGCTGGTGGACGTGCAGGCGCTGCGCAAGACGCGGCTGCTGGCGCTGCCCGAGCTGCGCGCCAGGCCTGAATTGGCCGACCTCGTGGTGCTGCGCAAGGGGAACCGGCTGTCGATCACGCCGGTGGAGCCGGCGCACTGGAAGATCATCGAGAAGATGCTGGCCTGA
PROTEIN sequence
Length: 158
MPTHSPNFWLMKSEPDEVSIDDALAAPGATVAWTGVRNYQARNFMRDGMKVGDGVLFYHSSCPEPGIAGIARVASGIKPDPTQFDPKSPYYDAGAKPEDPRWLLVDVQALRKTRLLALPELRARPELADLVVLRKGNRLSITPVEPAHWKIIEKMLA*