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cn_combo_scaffold_116_20

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(15426..16592)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035E68BC similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 387.0
  • Bit_score: 759
  • Evalue 1.40e-216
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 388.0
  • Bit_score: 752
  • Evalue 4.80e-215
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU39769.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax. similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 388.0
  • Bit_score: 752
  • Evalue 2.40e-214

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGAAGCTCAAGACACTGACGACGCTGGCCGTGCTGGGACTGATCGCGACGCTCGCGTCCGCGCAGCAGCAGCAGGGCGTGACCAAGGACGAGATCCGCATCGGCACCATCCAGGACCTGTCGGGTCCGCTCGCGGGCTTCGGCAAGCAGGCGCGCAACGGCATGCAGCTGCGCGTGGACGAACTCAACGAGCAGGGCAGCGTCAACGGCCGCAAGCTCAAGCTGTTCGTGGAGGACTCGGGCTACGACCCGAAGAAGGCCGTGCTGGCGGCGCAGAAGCTGGTGAACCAGGAAAAGATTTTCATCATGGCCGGCCACATCGGCACGGCGCAGAACATGGCGGCGATGCCGGTGCAGTTCGACAAGAACGTCATCAACTACATGCCCATCACGGCGGCGCGCGAAATGTACGAGCCGCTGAACCGGCTGAAGTACTCGTTCGCGGCCACCTACTACGACCAGATCCGGCTGGCGCTGCCGAAGATGATCAAGGACAAGGGCGCCAAGAAGGTCTGCACCATCTACCAGGACGACGAGTTCGGGCTCGAGGTGCAGCGCGGCGCCGAGGCGGGCCTGAAGGCCGCGGGCATGGAGCTGACCGAGAAGACCTCGTTCAAGCGCGGCGCCACCGACTTCAGCTCGCAGGTCGCGAAGATGAAGGCCGCCAACTGCGACCTCGTGGTGCTCGGCACCATCATCCGCGAGACCATCGGCACCGTGGGCGAGGCGCGCAAGACCGGCTTCAACCCGACCTTCCTGGGCTCGAGCGCGGCCTACACCGACCTGATCCACAAGCTGGGCGGCAAGGCGATGGACGGCATCTACGCCACCATGACGGTGCAGAACCCCTACACCGACGAGCAGTCGCAGCCGCTGCGCTTCTGGGCCAACAAGTACAAGACCAAGTTCAACGAAGACCCGACGGTGTTCTCGGTGTACGGCTACGTGATCATCGATTCGTTCATCAAGGCCGCGACCAAGGCCGGCCCGAACCTCACGACCGACAGCTTCATCAAGGCGATGGACAGCATCACCTTCGAGCCCGACATGTTCGGCAGCCCGAAGAGCACCTACACGGCCACCAAGCGCCTGGGCAACGACCAGTCGCGGCTGTCGCAGATCAAGGACGGCAAGTGGGTGGTGGTGTCCGACTATGTGACACCATGA
PROTEIN sequence
Length: 389
MKLKTLTTLAVLGLIATLASAQQQQGVTKDEIRIGTIQDLSGPLAGFGKQARNGMQLRVDELNEQGSVNGRKLKLFVEDSGYDPKKAVLAAQKLVNQEKIFIMAGHIGTAQNMAAMPVQFDKNVINYMPITAAREMYEPLNRLKYSFAATYYDQIRLALPKMIKDKGAKKVCTIYQDDEFGLEVQRGAEAGLKAAGMELTEKTSFKRGATDFSSQVAKMKAANCDLVVLGTIIRETIGTVGEARKTGFNPTFLGSSAAYTDLIHKLGGKAMDGIYATMTVQNPYTDEQSQPLRFWANKYKTKFNEDPTVFSVYGYVIIDSFIKAATKAGPNLTTDSFIKAMDSITFEPDMFGSPKSTYTATKRLGNDQSRLSQIKDGKWVVVSDYVTP*