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cn_combo_scaffold_116_26

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(22326..23156)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035E26E6 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 273.0
  • Bit_score: 510
  • Evalue 8.00e-142
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 3.40e-138
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGU52177.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 1.70e-137

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCAGCGAACGAGGACGACGCCGGCGGCAAGCGGCGCCGCACGGCAGGGCGAGCGCCTGATGTGGCTCACGCCGCACCGCGTGTTCTACGCCGGCCTGCTCGGCGCGGCCGCCGAACGCACGATGGGCGGGCACGGCGTGTACGTGTCGCCCGCCGGCGCGCCGCCGAACCGCATCCGCGTCGGCGGCGGCGCGTGGCTCACCGGTGAATTCATCGTCGTGCCGCCGCACGTGCCGCACCAGGTGGAGAGCGCGCATCCGCTGATCTTCAACCTGCTGGTGGAGTCGGAGTCGGTCGACCCCGCGCGCCTGCCGGCCTTCCTGCAGCACTGCGGCCCGGTCGATGCGCCGGCCTTCGTGCAGCGCGTGCGCGAGGCGCATGCGCACCTGCTGGCCGCCTCTGCGCGCGGCATGAACTTCGAGGGCTTCGACTTCGACGCGCTGTTCTTCGGCGAGGCGCTCGCGCCGCGCGTGCTCGACGCGCGCATCCGCAAGGTGGCCGACGCCATCAACGCCGACCCCGCCACGCCGATGTCGGCCGAGGAGTGCGCCGCGTCGGTGCACCTGTCGTTCTCGCGCTTCCTGCACCTGTTCAAGCAGGAGACCGGCATGGCCTTCCGCGCCTTCCGCGCATGGAAGCGCGCGCGCAGCCTGCTGCGCTACGTGCAGCAGGGCAGCACGCTCACCGACATCGCGCTCGACACCGGCTACCCCGACTCCACGCATTTCAGCCATTCGATCCGCCAGGTCTACGGCCTCAAGCCCAGCGACATCGTGGCCGGCTCGCGCCGCCTCGCGCTGCACGACCTGGCCGGCGGCTTCCGTCAGTAG
PROTEIN sequence
Length: 277
MQRTRTTPAASGAARQGERLMWLTPHRVFYAGLLGAAAERTMGGHGVYVSPAGAPPNRIRVGGGAWLTGEFIVVPPHVPHQVESAHPLIFNLLVESESVDPARLPAFLQHCGPVDAPAFVQRVREAHAHLLAASARGMNFEGFDFDALFFGEALAPRVLDARIRKVADAINADPATPMSAEECAASVHLSFSRFLHLFKQETGMAFRAFRAWKRARSLLRYVQQGSTLTDIALDTGYPDSTHFSHSIRQVYGLKPSDIVAGSRRLALHDLAGGFRQ*