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cn_combo_scaffold_183_5

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(3569..3904)

Top 3 Functional Annotations

Value Algorithm Source
UPF0060 membrane protein WQQ_04550 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T958_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 108.0
  • Bit_score: 188
  • Evalue 4.80e-45
UPF0060 membrane protein RT97_26805 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 111.0
  • Bit_score: 225
  • Evalue 2.90e-56
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 108.0
  • Bit_score: 179
  • Evalue 6.30e-43

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGAAGTGCTCAAGACCCTCTCTCTTTTTGTCGTGACGGCACTGGCGGAAATTGTCGGCTGCTATCTACCCTACCTCTGGCTGAAGCAAGATCGCTCGGCTTGGCTGCTGGTGCCTGCCGGGATAGCGTTGGCGCTCTTTGCCTGGCTGCTTTCGTTACACCCTGCGGCGGCCGGCCGTGTCTATGCCGCCTACGGTGGCGTCTACATCGGCGTGGCCATCCTGTGGCTTTGGTCGGTGGACGGCATCCGGCCGACCACGACCGATTGGATAGGCGTTGCTGTGAGTCTCGCCGGCATGGCGATCATCATGTTCGGCCCGCGGCCCACCGCCTAG
PROTEIN sequence
Length: 112
MEVLKTLSLFVVTALAEIVGCYLPYLWLKQDRSAWLLVPAGIALALFAWLLSLHPAAAGRVYAAYGGVYIGVAILWLWSVDGIRPTTTDWIGVAVSLAGMAIIMFGPRPTA*