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cn_combo_scaffold_192_4

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(5482..6456)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003716BE7 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 324.0
  • Bit_score: 596
  • Evalue 1.70e-167
Uncharacterized protein {ECO:0000313|EMBL:EJL69884.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 324.0
  • Bit_score: 590
  • Evalue 1.70e-165
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 325.0
  • Bit_score: 547
  • Evalue 2.60e-153

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAAATTGCGCCTGAAACACCTCGCCCTGGCCCTCGCGGCCGCCGCCGGACTCGCCACCACGCCGCTGTGGGCACAGCACAACGACAAGCCCCTGCGCCTCGTCGTGCCCTTCGCCACCGGCGGCGCGCAGGACGTGATCGCCCGCTACCTGGGCGCCAAGCTCACCGACAAGCTGGGCCAGCCGGTCATCATCGACAACAAGGCCGGCGCCGGCGGCATCGTGGCCGCCGACGCGGTGGCCAAGGCGACCGACGGCGCCACGGTGCTGCTGGCCACGGGCGGCGCGGTCACCATCGCGCCCCATCTGCAGGCCAGGCTGCCCTACGACCCGGTGCACGAGCTGGTGCCGGTGGCGCTGGTGGCCGACACGCCCATGACGCTGTCGGTGCGCACCGAAAGCCCCTACAAGACCGTGGCCGATGTGCTCCGCGACGCCAAGGCCCGGCCCGGCCTGGTGACCTACGCCTCGACCGGCAACGGCACCGTTTCGCACCTGACCGGGGCGCTGCTGGCCCAGGCGAGCGGCGTGAACCTGCTGCATGTGCCCTACCGGGGCGCGGCGCCCGCCATGACCGACCTGCTGGGCGGACAGGTGGCGACCATCGTGACCAGCGTGGCCTCCATCGAGCCCATGGTCGCCAGCGGCAAGGCGCGCGTGCTGGGCACCTTCTCTCGCGTGTCCCTGCCCAGCATGGGCTCGGCGCCCACCATTGGCGAGGCCACCGGTCTGCCGGGCATGGAAGTGCCGGTCTGGGTCGGCGTGATGGCGCCGGCGCGGATGCCGGCGGCGGCCATCGAAAAGCTGTCGGCGGCGCTGGTGGAGGTGTGCAACCTGCCTGAGACAAAGCAGCGCTTCGCCCAGCTGGGCGCGGTCAACACCTGCGGCGGCCCAGCCGCATTGGGCAAGGTCGTCGCGGAAGACAGCCAGCGCTGGGCCAAGGTCATCAAGCAAGGCGGGATCAAGGTTGAATAA
PROTEIN sequence
Length: 325
MKLRLKHLALALAAAAGLATTPLWAQHNDKPLRLVVPFATGGAQDVIARYLGAKLTDKLGQPVIIDNKAGAGGIVAADAVAKATDGATVLLATGGAVTIAPHLQARLPYDPVHELVPVALVADTPMTLSVRTESPYKTVADVLRDAKARPGLVTYASTGNGTVSHLTGALLAQASGVNLLHVPYRGAAPAMTDLLGGQVATIVTSVASIEPMVASGKARVLGTFSRVSLPSMGSAPTIGEATGLPGMEVPVWVGVMAPARMPAAAIEKLSAALVEVCNLPETKQRFAQLGAVNTCGGPAALGKVVAEDSQRWAKVIKQGGIKVE*