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cn_combo_scaffold_192_11

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 15739..17016

Top 3 Functional Annotations

Value Algorithm Source
Putative benzoate transporter n=1 Tax=Variovorax paradoxus B4 RepID=T1X5D5_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 424.0
  • Bit_score: 709
  • Evalue 2.40e-201
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27466.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 425.0
  • Bit_score: 761
  • Evalue 5.60e-217
putative benzoate transporter similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 424.0
  • Bit_score: 709
  • Evalue 6.70e-202

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGTCGTTCTTCAAAGACCTGAGCCTGTCGGCCTTCACCGCGGGCTTCGTCGCGGTGCTCGTGGGTTTCACGAGTTCGGTGGCCATCGTGTTCCAGGCCGCGCAGGCCTTCGGCGCCACGCCGGAGCTGGCGGCCTCGTGGATGTGGGCGCTGGGCATCGGCATGGGGCTGGCCTCCGCGCTGCCCTCGCTGTGGTGGAAGAAGCCCGTGATGATCGCCTGGAGCACGCCCGGCGCCGCCGTGCTGGCTGTCGCCGGCATGGGCTACGGCATGGGCGAGGCGGTGGGCGCGTTCATCGTCTGCGCGGTGCTGATCGTGCTGGCGGGGGCCACCGGCTGGTTCGAGCGGGTGATGAACAGGATTCCGATGGCGATCGCCTCCGCGCTGCTCGCGGGCGTGCTCGCGCGCTTCGGCCTGTCGGCCTTCATCGCGGCGCAGACCGCGCTGCCTCTGGTGCTGCTGATGCTCGGCACCTACCTCGTCGGCAAGCGCCTGCTGCCGCGCTATGCGGTGCCGCTCACGCTGCTGGTCGCCATCGTGTACGCGGCGGCGCGCGGGCAACTGGCGTGGTCGGCAGTGCATTTCTCGTTCACCTGGCCGGTGTTCACGATGCCGGTCTTCAGCTGGCAGGCGATCGTGAGCCTGGCGCTGCCGCTGTTCGTCGTAACGATGGCCTCGCAGAACCTGCCGGGCGTGGCCGCCATCCGCGCTTCGGGTTATGGCGATCTGCCGGTCAGCAAGCTCATCACCATCAGCGGGCTGACGACGCTGGTGCTCGCGCCCTTCGGCGCCTTCGCGCTGAACCTGAGCGCCATCACCGCCGCCATCTGCATGGGCCGCGAGGCGCATGAAGACCCGGCGCGGCGCTACACGGCGGCGGTGAGCTGCGGCGCGATCTACGTGGTGATCGGGCTGTTCGGCGCTGCGGTCACCGGGCTGCTCACGGCGTTTCCGAAGGAACTGGTCGCGGCCATCGCCGGGCTGGCGCTGCTGGGCACCATCGGCGGCGGGCTCGCGGCGGCAGTGCGCGACGAGTCGCACCGCGAGGCGGCGTTGATCACCTTCCTGGTCACGCTCTCCGGCGTCACGCTGGCGGGCATCGGCTCGGCGTTCTGGGGCGTGGTGGCCGGGGCGGTGGCGCTGGCCGTGCAGCACGTCGGGCGCGCATCGCCCCCGGAAAAGGCCCCTGCCGGCAAGGACATCGCCGCTTCCGGCAACATCGCGCCCGATACCCAAGTGCAAGTGGCCGCCGCTCCCGGCGCCGGAAAGAACGCCTGA
PROTEIN sequence
Length: 426
MSFFKDLSLSAFTAGFVAVLVGFTSSVAIVFQAAQAFGATPELAASWMWALGIGMGLASALPSLWWKKPVMIAWSTPGAAVLAVAGMGYGMGEAVGAFIVCAVLIVLAGATGWFERVMNRIPMAIASALLAGVLARFGLSAFIAAQTALPLVLLMLGTYLVGKRLLPRYAVPLTLLVAIVYAAARGQLAWSAVHFSFTWPVFTMPVFSWQAIVSLALPLFVVTMASQNLPGVAAIRASGYGDLPVSKLITISGLTTLVLAPFGAFALNLSAITAAICMGREAHEDPARRYTAAVSCGAIYVVIGLFGAAVTGLLTAFPKELVAAIAGLALLGTIGGGLAAAVRDESHREAALITFLVTLSGVTLAGIGSAFWGVVAGAVALAVQHVGRASPPEKAPAGKDIAASGNIAPDTQVQVAAAPGAGKNA*