ggKbase home page

cn_combo_scaffold_192_13

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(17989..20205)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Variovorax paradoxus RepID=UPI00037E0C0F similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 740.0
  • Bit_score: 1349
  • Evalue 0.0
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AGU47644.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 741.0
  • Bit_score: 1347
  • Evalue 0.0
TonB-dependent siderophore receptor similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 741.0
  • Bit_score: 1347
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2217
ATGCCCGCACCTCATTTCTACCTTCGGCCAACCGTGGTCGCAACGCTGCTCACGCTCAATGCCGTGGCGGCACTGGCCCAGAACACCACGGCCGAACCGGCCGCCGGAGCGGCATCGAGCGGCACCCTGGCCACGGTGAACGTGGAAGCCAGCGCCGACGCATCGGCCGAAGGCCTGACCAAGCCCTACGCCGGCGGCCAGGTGGCGCGCGGCGGGCGCGTCGGCATCCTGGGCAACCAGGACATGATGAGCACGCCCTTCTCCAGCACCAACTACACCAACGAGCTGATCCAGGACCAGCAGGCCAAGAGCGTGGCCGACGTGCTGCTGAACGACCCGTCGGTGCGCCAGGCCCGCGGCTTCGGCAACTTCCAGGAGCTGTACGTGGTGCGCGGCTTCCCCGTGTACTCGGACGACGTCTCGTACAACGGCCTCTACGGCATGCTGCCGCGCCAGTACATCGCCTCCGAATTCTTCGAGCGCGTGGAAGTGTTCCGCGGCGCCAACACCTTCCTGAACGGCGCGGCCCCCGGCGGCAGCGGCATCGGCGGTGCGATCAACCTGCTGCCCAAGCGCGCGCCCAACGAGCCGCTCACGCGTGTCGGCTTCGGCGTGCAAAGCGGCGGCCAGGGCTTCGTCAACCTCGACCTGGCACGCCGCTTCGGCCCCGACGACAGCCTGGGCGTGCGCGTGAACGCGGTGCGCCGCGAAGGCGGCACCGGCGTGAACAAGGAAAGCCAGCAGCTCAGCGCCTTCGGCATCGGGCTCGACTGGCACAACCGCAACGTGCGCCTGTCGGCCGACTTCGGCTATCAGGACTACGACCTGAAGGACGGCCGCCCGAGCCTGACGCCCTCTTCCACGCTGCCGATCCCGCGCGCGCCCGACGCCCGCACCAACTTCGCCCAGCCCTGGACCTACTCCAAGGAAAAGGACAAGTTCGCCACCTTCCGCGGCGAAGTCGACATCACCGACAACATCACGGCCTGGGCCGCCGGCGGCGTGCGCCGCAGCAGCGAAGACAACGTGCTGTCGAACCCGACGCTCACCGACGCCTTCGGCAACACCAGCAACACGCGCTTCAGCAACACCCGCGAAGACCGCATCGGCACCGGCGAGATCGGCGTGCGCGGCAACTTCACCACCGGCCCGGTAAAGCACACGCTGGTGGCCTCGGCCGCCAAGTACAGCAACGATCGCGACAACGCCTACGCCATCTCGGCGCAGAGCGTGCGCAACAACATCTACACGCCGTACGCGTCGCCCAACCCGATCGCCAACGGCGCGTTCGTGGGCAACACGCTGGACAACCCGCGCCTGACCGACCGCATCGACACCGCGAGCGTGGCCATCGCCGACACCATGGCCTTCATGGACGACCGCCTGCTCGTCACGCTCGGCGCGCGCCGCCAGACCATCGAGCAGACCAGCTACGCCTACAACACGCTCAAGCAAACCAGCTACTACGACAAGAGCAAGACCACGCCGGTGGCCGGCGTCGTGTTCAAGATCACGCCGACAGTCTCGGCCTACGCCAACTACATCGAAGGCCTGGTCAAGGGCAACGTGGCGGGCACCACGGTGAACAACCGCCCCGTCACCAATGCCGGCGAAATCTTCGCGCCCTACCAGGCCAAGCAGAAGGAAGTCGGCGTCAAGTACGACGGCGGCACGCTCGGCGCCAGCGCCGCGTTCTTCACCACCGACCAGCCGACGTATTACTACTCGGGCCAGACCTACGGCCTGTACGGCAAGCAGCGCAACCAGGGCCTGGAGTTCTCGGTGTTCGGCCAGCCGACCAAGGGCCTGCGCCTGCTCGGTGGCCTGACGCTGCTCGACGCCAAGCAGAAGAACACCCAAGGCGGCGCCACCGACGGCCTCACCGCCATCGGCGTGGCCAAGCAACAAGCCAACCTGGGCGCCGAATGGGACGTGCCGGGCCTGCGCAATCTGTCGCTGAACGCCCGCGTGCTCTACACCTCGAAGCAATACGCCAACGCCACCAACACCCAGTCGGTGCCGTCGTGGACGCGCTTCGACATCGGCGCGCGCTACCTGGTCGACCTGGGCAACGGCCGTGCGCTCACGCTGCGCGCGCGCATCGACAACCTGTTCAACAAATCGTACTGGGCCTCGGTGGGCGGCACGCAGGGCAGCAACTACCTGGTGCTGGGCGCGCCGCGCACCTTCTCGCTGAGCGGCACCATCGACTTCTGA
PROTEIN sequence
Length: 739
MPAPHFYLRPTVVATLLTLNAVAALAQNTTAEPAAGAASSGTLATVNVEASADASAEGLTKPYAGGQVARGGRVGILGNQDMMSTPFSSTNYTNELIQDQQAKSVADVLLNDPSVRQARGFGNFQELYVVRGFPVYSDDVSYNGLYGMLPRQYIASEFFERVEVFRGANTFLNGAAPGGSGIGGAINLLPKRAPNEPLTRVGFGVQSGGQGFVNLDLARRFGPDDSLGVRVNAVRREGGTGVNKESQQLSAFGIGLDWHNRNVRLSADFGYQDYDLKDGRPSLTPSSTLPIPRAPDARTNFAQPWTYSKEKDKFATFRGEVDITDNITAWAAGGVRRSSEDNVLSNPTLTDAFGNTSNTRFSNTREDRIGTGEIGVRGNFTTGPVKHTLVASAAKYSNDRDNAYAISAQSVRNNIYTPYASPNPIANGAFVGNTLDNPRLTDRIDTASVAIADTMAFMDDRLLVTLGARRQTIEQTSYAYNTLKQTSYYDKSKTTPVAGVVFKITPTVSAYANYIEGLVKGNVAGTTVNNRPVTNAGEIFAPYQAKQKEVGVKYDGGTLGASAAFFTTDQPTYYYSGQTYGLYGKQRNQGLEFSVFGQPTKGLRLLGGLTLLDAKQKNTQGGATDGLTAIGVAKQQANLGAEWDVPGLRNLSLNARVLYTSKQYANATNTQSVPSWTRFDIGARYLVDLGNGRALTLRARIDNLFNKSYWASVGGTQGSNYLVLGAPRTFSLSGTIDF*