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cn_combo_scaffold_590_9

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9752..10717)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C4998 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 321.0
  • Bit_score: 582
  • Evalue 1.90e-163
AraC family transcriptional regulator {ECO:0000313|EMBL:EPX99564.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 321.0
  • Bit_score: 415
  • Evalue 5.70e-113
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 321.0
  • Bit_score: 367
  • Evalue 3.60e-99

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Taxonomy

Ralstonia sp. AU12-08 → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGCACGACTTCACGATCCTGGTGCTGCCCGGCGCCTTCAACTCCAGCGTCGCGGTCACGCTCGACATCCTCGGCGCCGCGCAGGCATTGGCTCCGCGTGCCGGCGTGGCGCCGCCGCGCTGGCGGCTGTGCTCGGTGCAGGGTGGCCCGGTGCCGTTGCAAGCCGGCATGACCATCGACACCGCGCGCCTGCCCATACGGCCGCGCGACGACCGCTCGACATGGGTGGTGCCGGGGCTCGGCCTCAACACACCGGGCGACATCCGCCGCTGCCTCGAAAGCGACGACGCGGCCAAGGCAGTCGCTGGCCTGGTGCGGCACGCAAAGGCTGGCGGGCAGGTCGCGGCCTCGTGCTCCGCCGTGTTCCTGCTGAACGCGGCCGGGCTGCTTCAGGACAGGCGCGCGACCACCTCGTGGTGGTATGCGCCGCTGCTCGCCCGCATGGCGCCCGGCTGCACCGTCGATGCCGACCGCATGGTGTGCGCCGACGGCCCGGTGGTCACGGCAGGCGCCGCGTTCGCGCAGACCGACTTGATGCTGCACCTGCTGCGCGAGCGTTGCGGCAGTGCGCTCACCGACCTGGTCTCGCGCATGCTGCTGATCGACGGGCGCCAGGCACAGGCGCCGTTCGTGGTGCCGGAGCTGCTGGCCAACGGCAACGACCTGGTGGCGAAGCTGGCCGCGCGCGTCGAGTCGGCATTGCCCGACGCGCCTGCCGTCAGCGTGCTGGCGCGCGAGTTCTGCATGTCGGAGCGCACGCTGTCACGCCACATCCACAAGGCCACCGGCAAGAGCACGCAGGCGCTGGTGCAGAGCGTGCGCCTGCGCCGCGCCCGCGCGCTGCTCGAAACCAGCCGCATGACCGTCGAGCAGGTGGCCGGCGCGGTGGGCTACCAGGACGCCACGGCGCTGCGGCGTCTGATGAAGAAGGTGGCGGGGGCGAATCCGAGCCGCTATCGCGGTTGA
PROTEIN sequence
Length: 322
MHDFTILVLPGAFNSSVAVTLDILGAAQALAPRAGVAPPRWRLCSVQGGPVPLQAGMTIDTARLPIRPRDDRSTWVVPGLGLNTPGDIRRCLESDDAAKAVAGLVRHAKAGGQVAASCSAVFLLNAAGLLQDRRATTSWWYAPLLARMAPGCTVDADRMVCADGPVVTAGAAFAQTDLMLHLLRERCGSALTDLVSRMLLIDGRQAQAPFVVPELLANGNDLVAKLAARVESALPDAPAVSVLAREFCMSERTLSRHIHKATGKSTQALVQSVRLRRARALLETSRMTVEQVAGAVGYQDATALRRLMKKVAGANPSRYRG*