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cn_combo_scaffold_590_15

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(15145..15813)

Top 3 Functional Annotations

Value Algorithm Source
glutamate/aspartate transporter permease GltK n=1 Tax=Variovorax paradoxus RepID=UPI00035DD852 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 222.0
  • Bit_score: 430
  • Evalue 1.40e-117
polar amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 222.0
  • Bit_score: 388
  • Evalue 1.40e-105
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADX47876.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax. similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 222.0
  • Bit_score: 388
  • Evalue 6.80e-105

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGATGAATCTCGACTTTTCCTTCTACAACTGGAGCCTGGTCAGCACGTATGTGCTGAAGGGCTTCTATTTCAGCGTCATCCTGACGGTCGTGGCCACCCTGGGCGGCATCTTCTTCGGCACCTTGCTGGCGCTCATGCGCCTGTCGGGCAAGAAGTGGCTGGACTTTCCCGCCGCGGCCTACGTCAACGGCATGCGCTCCGTGCCGCTGGTGATGGTGATCCTGGGCTTTTTCCTGCTGGTGCCCTTCGTGATCGGCCATCCCATCGGGGCGGAAACCTCGGCCGTCATCACCTTCATCTGCTTCGAGGCGGCCTACTTCTCCGAGATCATGCGCGCCGGCATCCAGTCGATCCCGCGCGGGCAGGTCTTCGCCGGCCAGGCCGTGGGCATGACCTACAGCCAGAACATGAAGCTGGTCATCCTGCCCCAGGCCTTCCGGAACATGCTGCCGGTTCTGCTCACGCAGACCATCATCCTGTTCCAGGACACCTCGCTGGTCTACGCCATCGGCGCCTACGACATGCTCAAGGGCTTCGAGACCGCTGGCAAGAACTTCGGCCGTCCGGAAGAGGCCTACCTGCTGGCCGCCGTCGTCTATTTCGTCTTGTGTTACGCCCTTTCCTGGCTGGTGAAGCGCCTGCACAAGAAAATCGCCATCATTCGCTGA
PROTEIN sequence
Length: 223
MMNLDFSFYNWSLVSTYVLKGFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAAAYVNGMRSVPLVMVILGFFLLVPFVIGHPIGAETSAVITFICFEAAYFSEIMRAGIQSIPRGQVFAGQAVGMTYSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNFGRPEEAYLLAAVVYFVLCYALSWLVKRLHKKIAIIR*