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cn_combo_scaffold_590_19

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(19370..20356)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CMH8_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 327.0
  • Bit_score: 626
  • Evalue 1.20e-176
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 327.0
  • Bit_score: 626
  • Evalue 3.40e-177
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS17479.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 327.0
  • Bit_score: 626
  • Evalue 1.70e-176

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGAAACTAAGTGGCTAGAAGACTTCATCAGCCTTGCGGAAACGCGCAGCTTCAGCCGCTCGGCCCAGTTGAGGCATGTAACCCAGCCGGCGTTCTCGCGCCGCATCCAGGCGCTCGAAGGCTGGGCCGGCACCGACCTGGTGGACCGCAGTTCATACCCGACGCGCCTCACGCCCGCCGGCCAGACGCTCTACAGCCAGGCCATCGAAATGCTGCAGTCGCTGCAGAGCACGCGCGCCATGCTGCGCGGCCACTCGGCCGCGGGGCAGGACGTGATCGAGTTCGCGGTGCCGCACACGCTGGCCTTCACCTTCTTCCCGGCCTGGGTCACGACGCTGCGCGAGCACTTCGGCCCCATGAAGAGCCGGCTGATCGCGCTCAACGTGCATGACGCCGTGCTGCGGCTGGTCGAAGGCAGCTGCGACCTGCTGATCGCCTATCACCACCCCTCGCAGCCGCTGCAGCTCGATGCCAACAAGTACGAGATGGTCAGCCTCGGCGAAGAAACCGTCGCCCCCTGGGTCAAGGCCGACGCCGACGGCGCGCCGCGCTACCGGCTGCCGGGCCGCCCGGGCCAGCCGCTGCCTTACCTGGGCTATGCGCCGGGCGCCTACCTGGGCCGGGTGGTCGACCAGCTGCTGAAGGAGTCGGGCACCGCCATCCACCTCGACCGCGTCTATGAAACCGACATGGCCGAGGGCCTGAAGGTGATGGCGCTCGAGGGCCACGGCATCGCCTTCCTGCCGCAGAGCGCGGTGCGCAAGGAGATCAAGGCGCGCAAGCTGGTGAGCGCGCTGCCGCCCGAGATCGACAGCCTGGAGGCGACGATGGAAATCCGCGCCTACCGCGAGCGGCCGACCGCGCCCGCGCCGGTCAAGGGCGCTTCCGGCCGCGCCGCCAAGGCGCCGTCTCCCGACAGCCTGCAGCCCAAGGGCACGGCCGACGCGCTGTGGTCGTACCTGGTCGGCACCCAGCCGCCGCGCTGA
PROTEIN sequence
Length: 329
METKWLEDFISLAETRSFSRSAQLRHVTQPAFSRRIQALEGWAGTDLVDRSSYPTRLTPAGQTLYSQAIEMLQSLQSTRAMLRGHSAAGQDVIEFAVPHTLAFTFFPAWVTTLREHFGPMKSRLIALNVHDAVLRLVEGSCDLLIAYHHPSQPLQLDANKYEMVSLGEETVAPWVKADADGAPRYRLPGRPGQPLPYLGYAPGAYLGRVVDQLLKESGTAIHLDRVYETDMAEGLKVMALEGHGIAFLPQSAVRKEIKARKLVSALPPEIDSLEATMEIRAYRERPTAPAPVKGASGRAAKAPSPDSLQPKGTADALWSYLVGTQPPR*