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cn_combo_scaffold_590_22

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(22952..24784)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9L7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 613.0
  • Bit_score: 1132
  • Evalue 0.0
Variovorax paradoxus strain MEDvA23 contig_79, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22980.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 610.0
  • Bit_score: 1137
  • Evalue 0.0
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 613.0
  • Bit_score: 1132
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1833
ATGCGCCGCGGCGGCGAAGCCCTCACCCCCTCCCACACCGTGTCCGGCCATCCGCCGGAGCGCGGCGACCGTTCCGACTGGGCGACGCTGCGGCGCCTGTTTCCCTACCTCTGGCAGTACAAGTGGCGGGTGATCGCCGCGCTCACGTTCATGGTGGGCGCCAAGGTGGCCAACGTGGGCGTGCCGGTGCTGCTGAAGAACCTGGTCGACACCATGACGCCCAAGCCGGACATGGCCCAGGCGCTGCTCATCGTGCCCATCGGCCTGCTGCTGGCCTACGGCCTGCTGCGCTTTTCCACGGCGCTCTTCGGCGAGCTGCGCGAGCTGATCTTCGCCAAGGCCACCGAGGGCACGGCGCGGCAGATCGCGCTGGAAGTGTTCGGCCACCTTCATTCGCTGAGCCTGCGCTTTCATTTGGAGCGCCAGACCGGCGGCATGACGCGCGACATCGAGCGCGGCACGCGCGGCGTGCACTCGCTCATCTCGATGTCGCTCTACAGCATCGTGCCGACCATCATCGAACTGGTGCTGGTGCTCTGCATCCTGGGCGTGAAGTTCGATTCGCTGTTCGTGTGGATCACTTTGGCGGCGCTGGTGCTGTACATCACCTTCACGGTCACGGTGACGGAATGGCGCACGCAGTTCCGCAAGACCATGAACGAGCTCGACTCCATGGCCCAGAGCCGTGCGGTCGATTCGCTGCTGAACTACGAGACCGTCAAGTACTTCAACAACGAGGAGTTCGAGGCAAAGCGCTACGACGCCAGCCTCGACCGCTACCGCAAGGCCGCCATCAAGAGCCAGCGCACGCTGAGCATGCTCAACACCGGGCAGCAGGCGCTGATTGCCATCAGCCTGGTGCTGATGCTGTGGCGCGCCACCTCGGGCGTGGTCGATGGGCGCATGACGCTGGGCGACCTGGTGATGGTCAACGCCTTCATGATCCAGCTCTACATTCCGCTCAACTTCCTGGGCGTGATCTACCGCGAGATCAAGCAGAGCCTGACCGACCTCGACAAGATGTTCGTGCTGATGGAAAAAGAGCGCGAGGTGCGCGACGCGCCCGAGGCGCAGCCGCTGGCCGGCACCGATTCGACGGTGCGCTTCGAGGACGTGAGCTTCGCCTACGAGCCCGCGCGGCCGATTCTCAAGCATGTGAGCTTCGAGATCCCGGCCGGCAAGACGGTGGCGGTGGTCGGGCCTTCGGGCTCGGGCAAGTCCACGCTGGCGCGCCTGCTGTACCGCTTCTACGACGTGCAGCACGGACACATCACCATCGGTGGCGAAGACATCCGCGACGTGACCCAGTCGAGCGTGCGCCGCGCCATCGGCATCGTGCCGCAGGACACGGTGCTGTTCAACGACACGGTCGAATACAACATCGCCTACGGCCGCCCCGGCGCCACGCGCGAAGAGGTGGAGGCCGCCGCGCGTGCCGCGCGCATCCACGACTTCATCTCGGCCACGCCCAAGGGCTACGAAACGACCGTGGGCGAGCGCGGGCTGAAGCTCTCGGGCGGCGAGAAGCAGCGCGTGGCCATCGCGCGCACGCTGCTGAAGAACCCGCCCATCGTGATCTTCGACGAGGCCACCTCGGCGCTCGATTCGGCCAACGAGCGCGCCATCCAGTCGGAACTCAAGAGCGCCGCGCAGGACAAGACCACGCTGGTCATCGCGCACCGCCTGTCGACGGTGGTCGACGCGCACGAGATCCTGGTGCTGGAGTCGGGCGTGATCGTCGAGCGCGGCACGCATGCCGAGCTGCTCGCGAAGCAGGGCCGCTACGCGCAGATGTGGGCTTTGCAGAAGAGCGAAGCAACACCGCTGATGTAG
PROTEIN sequence
Length: 611
MRRGGEALTPSHTVSGHPPERGDRSDWATLRRLFPYLWQYKWRVIAALTFMVGAKVANVGVPVLLKNLVDTMTPKPDMAQALLIVPIGLLLAYGLLRFSTALFGELRELIFAKATEGTARQIALEVFGHLHSLSLRFHLERQTGGMTRDIERGTRGVHSLISMSLYSIVPTIIELVLVLCILGVKFDSLFVWITLAALVLYITFTVTVTEWRTQFRKTMNELDSMAQSRAVDSLLNYETVKYFNNEEFEAKRYDASLDRYRKAAIKSQRTLSMLNTGQQALIAISLVLMLWRATSGVVDGRMTLGDLVMVNAFMIQLYIPLNFLGVIYREIKQSLTDLDKMFVLMEKEREVRDAPEAQPLAGTDSTVRFEDVSFAYEPARPILKHVSFEIPAGKTVAVVGPSGSGKSTLARLLYRFYDVQHGHITIGGEDIRDVTQSSVRRAIGIVPQDTVLFNDTVEYNIAYGRPGATREEVEAAARAARIHDFISATPKGYETTVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANERAIQSELKSAAQDKTTLVIAHRLSTVVDAHEILVLESGVIVERGTHAELLAKQGRYAQMWALQKSEATPLM*