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cn_combo_scaffold_590_24

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(25262..26437)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003807673 similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 390.0
  • Bit_score: 715
  • Evalue 4.00e-203
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 386.0
  • Bit_score: 693
  • Evalue 3.50e-197
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU35063.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 386.0
  • Bit_score: 693
  • Evalue 1.70e-196

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
GTGCGCCGGCGTACTTTGGGCTTGCTTGCGGGCGCGTTGGTCGCCGCGCCCGCACTGGTTTTCGCGCGGGTGCGGCCGCTGCGCATCGGCGTCATCGGCTCGTGGTCCGGGCCCTATGCGGGCGGCGGTCGCCAGTTCGATGCGGGCATGGCGGTCTGGCTGGCCGCGCACAACCACCACATCGCGGGCCGGCCGGTCGAACTGCTGCGGCGCGACGTGCCCGGCAGCGCGCCCGACCAGGCACGGCGCCACGCGCAGGACCTCGTGGAAAGCGAAAAGGTCGACCTGCTCAGCGGGCTCGACTTCAGCTCCAACGCCTATGCCGTGGGCGCCGTCGCGGCGCAGGCCCGGATGCCCCTCATCGTGATGAACGCCGCTTCATCGGGCATCACGGCGCGCTGCCCGTTCGCGGTGCGGGTTTCTTTCACCATTGCGCAGGTCACGCTGCCGCTGGCGCGCTGGGCGCTCCAGCAGGGGCTGCGCGACGTCTGCACGGTGGTGGCCGACTACGCCTCGGGCGTCGATGCCGAGAGCGCCTTCGTCTCGGGCATCACCGCGGGCGGCGGGCGGGTCGGCGCGATGCTGCGGGTGCCGCTGGCCACGCTCGACTACTCGGCCTACATGCTGCGGCTGCGCGAGCTCAAGCCGCAGGCGGTGTTCTTCTTCCTGCCCTCGGGGCAGATGCCGGCCGGCTTCCTCAAGTTCTGGCGCGACCGCGGCATGGCCGACACCGGTATCCGACTGCTCTCGACCGGCGACGCCACCGACGACAACTACCTCCAGGGCATCGGCGAGCTGGCCGACGGCCTGGTCACCAGCCATCACTATTCGTTTGCGCACGAATCCACGGCCAACCGGCGCTTCACGGGCGTCTTCGAGACCGAATACGGCAGCCACCTGCGGCCGGGCTACTTCGCGGTCGCTGCGCACGATGCGCTCGCGGCCATCGACGCGGCAATGAGCTCGCCCGCCGCGCGCGGCAACGCGGGCGGGGAGCGGCTGGTGGATGCGTTCCGGGGCCTGAAGCTCGACAGCCCGCGCGGCCCGCTCGAGATCGACGCCCACACGCGCGACGTGGTGCAGACCGTCTACATCCGCCGCGTGGAGCGCCAGGGCGGGCGCTGGATCAACCGCGAGTTCGAGCGCTTCGAGCGGGTGCGCGACCCCGGCGTCTGA
PROTEIN sequence
Length: 392
VRRRTLGLLAGALVAAPALVFARVRPLRIGVIGSWSGPYAGGGRQFDAGMAVWLAAHNHHIAGRPVELLRRDVPGSAPDQARRHAQDLVESEKVDLLSGLDFSSNAYAVGAVAAQARMPLIVMNAASSGITARCPFAVRVSFTIAQVTLPLARWALQQGLRDVCTVVADYASGVDAESAFVSGITAGGGRVGAMLRVPLATLDYSAYMLRLRELKPQAVFFFLPSGQMPAGFLKFWRDRGMADTGIRLLSTGDATDDNYLQGIGELADGLVTSHHYSFAHESTANRRFTGVFETEYGSHLRPGYFAVAAHDALAAIDAAMSSPAARGNAGGERLVDAFRGLKLDSPRGPLEIDAHTRDVVQTVYIRRVERQGGRWINREFERFERVRDPGV*