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cn_combo_scaffold_956_1

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 2..394

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component (Fragment) n=1 Tax=Variovorax sp. CF313 RepID=J2JHC8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 130.0
  • Bit_score: 251
  • Evalue 4.10e-64
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 130.0
  • Bit_score: 251
  • Evalue 1.20e-64
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL67330.1}; Flags: Precursor; Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 130.0
  • Bit_score: 251
  • Evalue 5.80e-64

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATCCCGACCTTCGCGCGCATCACGCGCGCGTCGGCCAATGCCATCTGGTCGCGCGAGTACGTGGCCGCCGCGCGCGCCTGCGGCAAGGGCTCGTTCGCGATCACCATGCAGCACGTGCTGCCGAACATTTCGGCCGTGCTGATCGTGCAGATCACCATCCGCTTCGCCATCGCCATCCTCGCGGAGGCGGCGCTCTCCTACCTCGGCCTGGGCACGCAGCCGCCGCAGCCCTCATGGGGCCGCATGCTCAGCGAAGCGCAGACCCTGATGTTCCAGCAGCCACTGCTGGCGGTTTTCCCCGGCATGGCGATCGCGCTGGCGGTGCTCGGCCTGAACCTGCTGGGCGACGGCCTGCGCGACCTGCTCGATCCGCGCCTTGCCCGCGCACGCTGA
PROTEIN sequence
Length: 131
IPTFARITRASANAIWSREYVAAARACGKGSFAITMQHVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTLMFQQPLLAVFPGMAIALAVLGLNLLGDGLRDLLDPRLARAR*