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cn_combo_scaffold_956_3

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 1406..2221

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003677269 similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 270.0
  • Bit_score: 481
  • Evalue 6.70e-133
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EJL73732.1}; Flags: Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 252.0
  • Bit_score: 467
  • Evalue 1.80e-128
putative oligopeptide/dipeptide ABC transporter, ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 270.0
  • Bit_score: 448
  • Evalue 1.40e-123

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGAGCCAGCCCACCACCGCCGGCCAGCCCTTGCTGGCCGTGAAGAACCTCTATCGCCACTACGCGCTGCCGCGCGAGAAGCTGTTCGGGCCGCCGCCCACGGTGAAGGCGCTCAACGGCGTGAGCTTCGATGTGCAGGCCGGCAAGAGCATGGGCATCGTCGGCGAATCGGGCTCGGGCAAATCGACCATCGCGCGCCTGGTGATGGCGCTGGACACGCCCACGTCTGGCACCGTCTCGCTCGAAGGCCGCGATCTGCATTCGCTGTCGAAGGAAGCGTTGCGCGTGGCGCGGCGCGACTTCCAGATGGTGTTCCAGGACCCGTATGGTTCGCTCGATCCGCGCCAGACCGTGGCGCGCATCGTGGCCGAGCCGCTGGAGGCGCTGGCCGAAACCAGCCGCGCCGAGCAGCGCGAGCGCGCATCGGAAGCACTCTCCGCCGTCGGCCTGCGCACCACCGACATGGACAAGTACCCGCACGAGTTCTCGGGCGGACAGCGCCAGCGCATCGCCATCGCGCGAGCGCTCATCACGCGTCCCAAGCTCATCGTGGCCGACGAGCCGGTGAGCGCGCTCGACGTGTCGGTGCAGGCCCAGGTGCTCAACCTCATGCAGGACCTGCAGCAGCAGTTCGGCATCAGCTACCTGCTCATCAGCCACGACCTCGCGGTGGTCAACCACCTGTGCGACGAAGTGTGCGTGGTCTTCAAGGGCCGCATCGTGGAGCGAGGCCGTCCGGCCGATCTCTTCGCGCATGCGCAGCACGAGTACACGCGCACGCTGCTGTCGGCGGTGCTGCACACGCCGTCTCGCTAG
PROTEIN sequence
Length: 272
MSQPTTAGQPLLAVKNLYRHYALPREKLFGPPPTVKALNGVSFDVQAGKSMGIVGESGSGKSTIARLVMALDTPTSGTVSLEGRDLHSLSKEALRVARRDFQMVFQDPYGSLDPRQTVARIVAEPLEALAETSRAEQRERASEALSAVGLRTTDMDKYPHEFSGGQRQRIAIARALITRPKLIVADEPVSALDVSVQAQVLNLMQDLQQQFGISYLLISHDLAVVNHLCDEVCVVFKGRIVERGRPADLFAHAQHEYTRTLLSAVLHTPSR*