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cn_combo_scaffold_956_10

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9511..10161)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003796FB3 similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 216.0
  • Bit_score: 408
  • Evalue 5.70e-111
Outer membrane protein/peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EJL79148.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 216.0
  • Bit_score: 405
  • Evalue 5.20e-110
putative outer membrane protein OmpA/MotB similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 217.0
  • Bit_score: 387
  • Evalue 2.30e-105
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGAAGAAACTGAATAAAGTGGCGATGATGTTTGCAGTCGCTGCGCTCGCCACTGCCGCCGGCGCGCAGACCCGTGTCACCGCTGCGGACGGCGGTCCTACGATCGACAACTGGCAAAACGGCACCGGCGAACTGGTTTGGAAGAACGGCACGAACGAACTGTGCTGGCGCGATGCCAACTGGACGCCCGCAACGGCTGCCGCTGGTTGCGACGGTGCTCTGGTTCCTGCCGCTCCGGTCGCTGTGGCTCCGACGCCTGTCGCTCCGGTTCCCCCGACGCCTCAGCAAGTCGCCGCTTCGAAGGTGACCTTCGCTGCTGACGCCTTCTTCGACTTCGACAAGTCGGTTCTGAAGCCCGAAGGTCGCGCGAAGCTGACCGATCTGGTCGAGAAGATCCGTGGCGTCAACCTCGAAGTGATCATCGCTGTGGGCCACACCGACTCGATCGGTACGGTTCCCTACAACCAGCGTCTGTCGGTCCGTCGCGCCGAAGCTGTCAAGGCCTTCCTGGTCTCGAAGGGCATCGAACGCAACCGCGTCTACACCGAAGGCAAGGGCAAGTCGCAGCCTGTGGCTGACAACAAGACCAAGGAAGGTCGCGCCAAGAACCGTCGCGTGGAAATCGAAGTGGTCGGCACCCGCGCCAACTAA
PROTEIN sequence
Length: 217
MKKLNKVAMMFAVAALATAAGAQTRVTAADGGPTIDNWQNGTGELVWKNGTNELCWRDANWTPATAAAGCDGALVPAAPVAVAPTPVAPVPPTPQQVAASKVTFAADAFFDFDKSVLKPEGRAKLTDLVEKIRGVNLEVIIAVGHTDSIGTVPYNQRLSVRRAEAVKAFLVSKGIERNRVYTEGKGKSQPVADNKTKEGRAKNRRVEIEVVGTRAN*