ggKbase home page

cn_combo_scaffold_956_18

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 20773..21099

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036F06A5 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 108.0
  • Bit_score: 212
  • Evalue 2.30e-52
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 108.0
  • Bit_score: 209
  • Evalue 2.10e-51
integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 108.0
  • Bit_score: 203
  • Evalue 3.00e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGACCCGCTCAGACCTCGTCGAAGAACTCGCAGCCCGCTTTGCGCAACTGACGCACCGCGACGCCGAATACGCAGTCAAGACCATCCTCGACGCGATGAGCGACGCGCTGGTGCGCGGACACCGCATCGAGATCCGTGGCTTCGGCAGCTTCTCGGTCAACCGCCGTCCGCCGCGCATCGGCCGCAACCCGCGTTCGGGCGAGAGCGTGCAGATCCCCGAAAAACGGGTGCCGCACTTCAAGCCCGGCAAGGCGCTGCGCGAAGCGGTGGATGCCAAGACGGCAGAGCTCGACGCCGGCAAGGAAGCCAAGGCCCGCAAGGCCTGA
PROTEIN sequence
Length: 109
MTRSDLVEELAARFAQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSVNRRPPRIGRNPRSGESVQIPEKRVPHFKPGKALREAVDAKTAELDAGKEAKARKA*