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cn_combo_scaffold_956_20

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 21485..22654

Top 3 Functional Annotations

Value Algorithm Source
Putative N-acetylglucosaminyl transferase n=1 Tax=Variovorax sp. CF313 RepID=J2L1M2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 389.0
  • Bit_score: 748
  • Evalue 4.20e-213
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 389.0
  • Bit_score: 748
  • Evalue 5.90e-213
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 392.0
  • Bit_score: 737
  • Evalue 1.60e-210

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGACTTTGATCCCAGCTGGCTGCTGATCGGCCTGCCCATCGCCTTCGTGCTGGGCTGGCTCGCATCGCGCTTCGACATCCGCCAGCTCAAGCTCGAGAACAGGCAAGCCCCCAAGGCCTACTTCCGCGGCCTGAACTTCCTGCTCAACGAGCAGCAGGACCAGGCCATCGACGCCTTCATCGAGGCCGTGCAGAACGACCCCGACACGCAGGAGCTGCATTTCGCCCTCGGCAACCTGTTTCGCCGCCGCGGCGAATACCAGCGCGCCGTGCGCGTGCACGAGCACCTGCTGGGTCGCGGCGACCTGAGTCGCACCGACCGTGAACGCGCCCAGCACGCCCTGGCGCAGGACTTCCTGCGCGCCGGCCTGCTCGACCGCGCCGAAGCCGCGCTGCAGAAGCTCGAAGGCACGCGCTACGAGAACGAGGCGCGGCTCTCGCTGCTGGCCATCTACGAACGCTCGCGCGAATGGGCCCAGGCCGCCGATGTGGCCCAGAAGCTCGACGAGTCCGACCAGGCGAGCTACGCCACGCGCCGCGCGCATCACCTGTGCGAGCAGGCCACCGAACGCGTGGCCGCCAGCGACCTGCCCGGCGCCACCAAGCTGCTGGCGCAGGCGGTCGAGCTGGCTCCGCAGGCGCCGCGCCCGGCCATCGATACCGCCAACCTCCAGCTGCGCAAGAGCGAGCCGGCCGCCGCCTTCGACACCCTCGTGGCACTCAGCGAAACCGCACCGCTCGCGCTGCCGCTCTATGCCGCCACGCTGCAGCAGGCGGCCGTCGGCGCGCATCGCGAAGGCGAAGCGCTGGCGCTGCTGCAGCGGCGCTATGTGGAGTCGCCGTCGATCGACGTGCTCGAGGCACTCATCGCCCTCGGCGGCACGCCCAGCGCCACCGCGGAAGAGCCGCAACCCACGCCGCGCGACGGCTACATCGCCCACCTCGCGCAGCAGCCATCGCTGGTGGCCGCGTCGCGCTGGCTCGCGGGCGAGCGCTTCGAGCACGAGCAGTTCCATCCGCAGGTGCAGCGCGCGCTCGACCAGGCCACGCGGCCGCTGATGCGCTATCGCTGCGCGGCCTGCGGTTTCGAGGCGCACCAGTACTTCTGGCACTGCCCCGGCTGCCAGGCTTGGGACAGCTATCCGCCCCGCCGCGTGGAAGAACTCTGA
PROTEIN sequence
Length: 390
MDFDPSWLLIGLPIAFVLGWLASRFDIRQLKLENRQAPKAYFRGLNFLLNEQQDQAIDAFIEAVQNDPDTQELHFALGNLFRRRGEYQRAVRVHEHLLGRGDLSRTDRERAQHALAQDFLRAGLLDRAEAALQKLEGTRYENEARLSLLAIYERSREWAQAADVAQKLDESDQASYATRRAHHLCEQATERVAASDLPGATKLLAQAVELAPQAPRPAIDTANLQLRKSEPAAAFDTLVALSETAPLALPLYAATLQQAAVGAHREGEALALLQRRYVESPSIDVLEALIALGGTPSATAEEPQPTPRDGYIAHLAQQPSLVAASRWLAGERFEHEQFHPQVQRALDQATRPLMRYRCAACGFEAHQYFWHCPGCQAWDSYPPRRVEEL*