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cn_combo_scaffold_1066_5

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 4134..6242

Top 3 Functional Annotations

Value Algorithm Source
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35742.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KIQ35742.1};; TaxID=34073 species="Bacteria; Proteobacteria; Bet similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 699.0
  • Bit_score: 1364
  • Evalue 0.0
transketolase n=1 Tax=Variovorax paradoxus RepID=UPI0003607A53 similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 700.0
  • Bit_score: 1363
  • Evalue 0.0
transketolase similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 704.0
  • Bit_score: 1326
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2109
ATGCCCATGGCAAACCAAGCCCTGATGGCCAACGCGATCCGCGCGCTGGCTATGGATGCCGTTCAACAAGCGAATTCCGGACATCCGGGTGCACCGATGGGCATGGCCGACATGGCCGTCGCACTGTGGGGCGAACACCTGCGCTACAACCCCGCGAACCCCCATTGGTTCGACCGCGACCGCTTCGTGCTCTCGAACGGCCACGCCTCGATGCTGCTGTACTCGGTGCTGCACCTGACCGGCTACGACCTGCCCATCGGCGAACTCAAGAACTTCCGCCAGCTGCACAGCAAGACCGCCGGCCACCCTGAAGTCGACGTGACGCCGGGCGTCGAAACCACCACCGGCCCGCTGGGCCAGGGCATCACCAATGCCGTGGGCTTCGCGCTGGCCGAGAAGCTGCTCGCCGCCGAATTCAACCGCAAGGACCACGACGTGGTCGACCACCACACCTACGCCTTCCTGGGCGACGGTTGCATGATGGAAGGCATCAGCCACGAAGCCTGCGCGCTGGCCGGCGCCTGGCACCTGAACAAGCTGATCGCGCTGTACGACGACAACGGCATCAGCATCGACGGCCAGGTCAAGCCCTGGTACATCGACAACGTGGCCGAGCGCTTCCACGCCTATGGCTGGCACGTGATCGGCCCGATCGACGGCAACGACGCCGCCGAAGTGTCCAAGGCCATTGCCAAGGCGAAGCAGTCGACCGACAAGCCCACGCTCATCAACTGCAAGACCGTCATCGGCAAGGGCAGCCCGAACCGCGCCGGCACCGCCAAGGCACACGGCGAGGCACTGGGCGCCGAAGAAATCAAGCTCACGCGCGACGCCATCGACTGGCACTACCCGCCCTTCGAGATCCCGGCCGAGGTGTACGCCGACTGGGACCACAAGGCCGAAGGCGCGAAGATCGAAGCCGCGTGGAACGACAAGTTCGCCGCCTACGCCGCTGCGTTCCCCGAACTCGCCGCCGAGTTCACCCGCCGCATGAAGGGCGAGCTGCCCAAGGACTTCCACCAGGTCGCGTTCGACACCGTGGTCGCCGCCCACACCAAGGCCGAGACCGTGGCCAGCCGCAAGGCCAGCCAGCTCGCACTGGAAGCCTTCACCGCCGCGCTGCCCGAAATGCTCGGCGGCAGCGCCGACCTGACCGGCTCCAACCTCACCAACACCAAGAGCACGCCCGCCCTGCGCTTCGACCCGAAGACCGGCGCCGTGGTCATGAACGTGCCCGCCGTCGAAGCCAAGCAAGGCGCCGAGGACGAAGCCAAGCCCGAAGCCCCCGCCGAAGTGCCGCACGGCACCATCGGCCGCCACATCAACTACGGTGTGCGCGAGTTCGGCATGGCGGCCATCATGAACGGCGTGTCGCTGCACGGCGGCTACATCCCCTACGGCGGCACCTTCCTCACCTTCAGCGACTACAGCCGCAACGCCATCCGCATGGCCGCGCTGATGAAGCGCCGCGTGGTGCATGTGTTCACGCATGACTCCATCGGCCTGGGCGAAGACGGCCCGACCCACCAGTCGATCGAACACGCCGCATCGCTGCGCCTCATTCCGAACCTCGACGTCTGGCGTCCGGGCGACACGGCCGAAACCGCCGTGGCCTGGGCCGTGGCGCTGCAGAACCAGTCGCGCCCCACGGCGCTGCTGCTGAGCCGCCAGAACATCGCCTACGCACCGAAGAGCGAGCTGGGCGACATCAGCCGCGGCGCCTACGTGCTCGCTGAGCCGGAAGTCGTCGGTCTCAAGAGCAAGAAGACGGCCGCCGTCATCATCGCCACCGGTTCCGAAGTGCCGCTCGCACTGGCCGCGCAGAAGCTGCTGGCCGAAAAGAAGATCGCCGTGCGCGTGGTGTCGATGCCCTCGACCACCACCTTCGACCGCCAGGACCTCGCCTACAAGAAGGCCGTGCTGCCCAAGAAGCTGCCGCGCATCGCCGTCGAAATGGGCTGCACCGGCGGCTGGTGGAAGTACGGCTGCGCCGCCGTCGTCGGCATCGACACGTACGGCGAGTCGGCGCCCGCGCCGCAGCTGTTCAAGCACTTCGGATTCACGGCGGAGAACGTTGCCGCCACCGTGGAAGCCGCACTGCGCGACTGA
PROTEIN sequence
Length: 703
MPMANQALMANAIRALAMDAVQQANSGHPGAPMGMADMAVALWGEHLRYNPANPHWFDRDRFVLSNGHASMLLYSVLHLTGYDLPIGELKNFRQLHSKTAGHPEVDVTPGVETTTGPLGQGITNAVGFALAEKLLAAEFNRKDHDVVDHHTYAFLGDGCMMEGISHEACALAGAWHLNKLIALYDDNGISIDGQVKPWYIDNVAERFHAYGWHVIGPIDGNDAAEVSKAIAKAKQSTDKPTLINCKTVIGKGSPNRAGTAKAHGEALGAEEIKLTRDAIDWHYPPFEIPAEVYADWDHKAEGAKIEAAWNDKFAAYAAAFPELAAEFTRRMKGELPKDFHQVAFDTVVAAHTKAETVASRKASQLALEAFTAALPEMLGGSADLTGSNLTNTKSTPALRFDPKTGAVVMNVPAVEAKQGAEDEAKPEAPAEVPHGTIGRHINYGVREFGMAAIMNGVSLHGGYIPYGGTFLTFSDYSRNAIRMAALMKRRVVHVFTHDSIGLGEDGPTHQSIEHAASLRLIPNLDVWRPGDTAETAVAWAVALQNQSRPTALLLSRQNIAYAPKSELGDISRGAYVLAEPEVVGLKSKKTAAVIIATGSEVPLALAAQKLLAEKKIAVRVVSMPSTTTFDRQDLAYKKAVLPKKLPRIAVEMGCTGGWWKYGCAAVVGIDTYGESAPAPQLFKHFGFTAENVAATVEAALRD*