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cn_combo_scaffold_1066_10

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9712..10650)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000361471F similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 307.0
  • Bit_score: 566
  • Evalue 1.80e-158
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35748.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 300.0
  • Bit_score: 550
  • Evalue 1.10e-153
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 300.0
  • Bit_score: 541
  • Evalue 1.30e-151

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGACCTCCCCTGTCCAGCCCGCCGACCTCGGCTTCTTCTCCGCGCTGGCGGCCTGCGGCAGCCTGAGCGCCGCGGCGCGCGAGCTGGGCATCAGCACGCCGGCCGTGAGCAAGCGGCTCTCGCAAATGGAAACCCGCCTGGGCGTGACGCTGGTGAACCGCACCACGCGGCGCATGAGCCTCACGCCCGAAGGCGAGCTCTACGTGGCCCATGCGCGCCGCATCCTCGGCGAGATCGACGACATGGCACAGCTGCTGGGCGGCGCGAAGGGCGAGGCGCAGGGCCTGCTGCGCGTGAACGCCACGCTGGGCTTCGGCCGCAGCCACGTGGCGCCGCTCATCTCGAAGTTCGTGCGCAAGCATCCGCAAGTGGAAGTGCAGCTGCAGCTGTCGGTCAATCCGCCGCCGCTGACCGACGACGCGTTCGACGTCTGCATCCGATTCGGCGCGCCGCCCGAAGCCCGCGTGATCGCGCGGCGCATTGCATCGAACCGGCGGCTGCTGTGTGCCTCGCCGGCCTACCTGGCGCGCGCCGGGCAGCCCAGGGTGCCCAACGACCTGGCGCATCACCGCTGCATCGGCATCCGCCAGGGCGACGAGGCCTACGGCATGTGGCGCCTGAGCACCGGCCGGGGCGCGGCGCAGCGCACCGAGGCGGTGAAGACGCGCGGCGCGCTCAGCACCAACGACGGCGAGATCGCGGTCAACTGGGCGCTCGAGGGACACGGCATCCTGATACGCGCCGAATGGGACATCGCGCGCTATCTGCGCAGCGGCCGGCTGGTGCAGGTGCTCGCGAACTACCGCACGCCCGACGCCGACATCTACGCCGTGTATCCGCAGCGCCACCAGCTGTCGGCGCGCGTGCGGACCTTCGTCGACTTCATCGCGGCGGCGCTGGGCAAGGACGCGGCCGAGCCTTCGCTCAACCGCCGCTGA
PROTEIN sequence
Length: 313
MTSPVQPADLGFFSALAACGSLSAAARELGISTPAVSKRLSQMETRLGVTLVNRTTRRMSLTPEGELYVAHARRILGEIDDMAQLLGGAKGEAQGLLRVNATLGFGRSHVAPLISKFVRKHPQVEVQLQLSVNPPPLTDDAFDVCIRFGAPPEARVIARRIASNRRLLCASPAYLARAGQPRVPNDLAHHRCIGIRQGDEAYGMWRLSTGRGAAQRTEAVKTRGALSTNDGEIAVNWALEGHGILIRAEWDIARYLRSGRLVQVLANYRTPDADIYAVYPQRHQLSARVRTFVDFIAAALGKDAAEPSLNRR*