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cn_combo_scaffold_1066_14

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(13336..14391)

Top 3 Functional Annotations

Value Algorithm Source
Pirin domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V005_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 351.0
  • Bit_score: 659
  • Evalue 2.30e-186
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35752.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 351.0
  • Bit_score: 663
  • Evalue 1.30e-187
pirin domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 351.0
  • Bit_score: 659
  • Evalue 6.50e-187

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGTCCGAACAAGACAACAGCCCCATCGTGCGGGTCGCCCCCCTCGGTTTCCCGTGGCAGACGATCGACCCGTTTTTGTTCTGCGTCTACCACGACGACGCCTACCCGCAAGGCAACGGGAGCATGGGCCCTGCCGCCTCGCTGGCCGGCCGCGACATCGGCCAGGACTTCAGCCGCAAGGACGGCTGGAGCATGTACCACGGCGACACGGTGCCGGGCTTTCCCTCGCACCCGCACCGCGGCTTCGAGACCGTGACCATCGTGCGCAAGGGCCTGGTCGACCACTCCGATTCGCTGGGCGCCACCGCGCGCTTCGGCGGCGGCGACGTGCAGTGGCTCACGGCCGGCAAGGGCATCGTGCACTCCGAGATGTTCCCGCTGCTCGACGCCGGCGCGCCGAACCCGCTGGAGCTGTTCCAGATCTGGTTGAACCTGCCAGCCCGCAGCAAGATGGCCGAGCCGCATTTCACGATGTTCTGGTCCGACGCCATTCCGCGCTTCTCGTCCGACGACGCGAAGGGCGGCCGCACCGAGGTCGCCGTGATCGCGGGCCGACTGGGCGACGCCGTCAACGGACAGGACCCGATCCAGCCGCTGGCGCCGCCACCCGATTCATGGGCCGCACAGGCCGATGCCGACGTGGCGATCTGGACGCTCAAGATGACGCCCGGCGCGCAATGGACGCTGCCGGCCGCCAGCGGCGAGGGCACGCGGCGCATGCTGTACTTCTTCAAGGGTGCGGCGGCTTTCGTCGCGGGCCGCCGCGTGGAAGGGCCGGCGGCCATCGAGTTGCGCGGCGATGCGGCGGTGGAAATCGCCAACGGCGCCGATGAAAGCGAGTTCCTGGTGCTGCAGGGCCGCCCGATCGCCGAGCCGGTGGTGCAGTACGGCCCCTTCGTGATGAACACGCAGGCCGAGATCAGCCAGACCATGGCCGACTACCGACGTACCCAGTTCGGCGGCTGGCCCTGGAAAGACTCGGCGCCGGTGCACGGTCGCGAGGCCGCGCGCTTCGCGAAGCATCCCGGCGGACACGAAGAAGTGCCCGAGGCCTGA
PROTEIN sequence
Length: 352
MSEQDNSPIVRVAPLGFPWQTIDPFLFCVYHDDAYPQGNGSMGPAASLAGRDIGQDFSRKDGWSMYHGDTVPGFPSHPHRGFETVTIVRKGLVDHSDSLGATARFGGGDVQWLTAGKGIVHSEMFPLLDAGAPNPLELFQIWLNLPARSKMAEPHFTMFWSDAIPRFSSDDAKGGRTEVAVIAGRLGDAVNGQDPIQPLAPPPDSWAAQADADVAIWTLKMTPGAQWTLPAASGEGTRRMLYFFKGAAAFVAGRRVEGPAAIELRGDAAVEIANGADESEFLVLQGRPIAEPVVQYGPFVMNTQAEISQTMADYRRTQFGGWPWKDSAPVHGREAARFAKHPGGHEEVPEA*