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cn_combo_scaffold_1066_30

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 28960..30102

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036342A3 similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 380.0
  • Bit_score: 707
  • Evalue 6.10e-201
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL79664.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 380.0
  • Bit_score: 700
  • Evalue 1.80e-198
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 380.0
  • Bit_score: 696
  • Evalue 3.10e-198

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGAAGACAAAAGCAAGCATGGTTTCGTTTCTCGGACTCGCGGCGCTTGCCGCAATCACCGTTTCCGGCCAGGTGCAGGCGCAGGAACAGGTGGTCAAGATCGGCCACAGCGGACCGCTGTCGGGCCCCAATGCCTTCGCGGGCAAGGACAATGAAAACGGCGTGCGCCTCGCCATCGAGGAGCTCAACGCGAAGAAGCTCATGGTCGGCGGCAAGACGCTGAAGTTCGAGCTGGTCTCCGAAGACGATCAGTGCGACGCCAAGACCGGCGTGAGCGTGGCGCAGAAGTTCGTGGACGACGGCGTGAAGTTCGTCATGGGCCCGTACTGCTCCGGCGTGGCCATTCCGGCCTCGCGCATCTACAGCGACGGCGGCGTGCTGCTGTCCACCGTGGGCACGAACCCCAAGGTCACGCAGGGCGGCTACAAGAACCTCTACCGCATCATCGCCAGCGACAACCAGATCGGCGGCGCGATGGCGGTCTATGCGGCCAAGGTGCTCAAGGTCAAGAAGGTCGGCGTGATCGACGACCGCACCGCCTTCGGCCAGGGCCTGGCGGAAGAGTTCACCAAGGAAGCCAAGACGCAGGGCCTCACGGTGGTCGGGCAGGAGTTCACCACCGACAAGGCCGTCGACTTCACCGCCATCCTGACCAACATGAAGGCCAAGTCGCCCGAGGCCATCTTCTTCGGCGGCTACGCGCCCCAGGCCGCTCCCATGGCCCGACAGATGAAGCAGCTGGCCGTGGCCGGCAAGCTGCTGGGCGGCGACACGGTCTGCAGCCCCGCCACCGGCAAGCTCGGCGGCGACGCGGTCAACGACGTGGTGTTCTGCGCGCAGGGCGGCTCCATCCTCGAGAAGGCACAGAGCGGCCCGGCGTTCAAGGAGAAGTTCAAGAAGCGCTTCAACATCGACGCCGATGCCTACGCCGCCTCTTACTACGACCAGGTGATGTTCATCGGCGAGTCGATGAAGAAGGCCAACTCCGTCGACCCCGACAAGGTGGGCGCCGAGCTCTACAAGACCACCTACAAGGGCGTGGCCGCCACCTACGCCTACGACGACAAGGGCAATATGAAGCAGGCGCCGATCACGGTGTTCACCTTCAAGAACGCCGCGCCCGTTCCCCTGGCCAGCTACTGA
PROTEIN sequence
Length: 381
MKTKASMVSFLGLAALAAITVSGQVQAQEQVVKIGHSGPLSGPNAFAGKDNENGVRLAIEELNAKKLMVGGKTLKFELVSEDDQCDAKTGVSVAQKFVDDGVKFVMGPYCSGVAIPASRIYSDGGVLLSTVGTNPKVTQGGYKNLYRIIASDNQIGGAMAVYAAKVLKVKKVGVIDDRTAFGQGLAEEFTKEAKTQGLTVVGQEFTTDKAVDFTAILTNMKAKSPEAIFFGGYAPQAAPMARQMKQLAVAGKLLGGDTVCSPATGKLGGDAVNDVVFCAQGGSILEKAQSGPAFKEKFKKRFNIDADAYAASYYDQVMFIGESMKKANSVDPDKVGAELYKTTYKGVAATYAYDDKGNMKQAPITVFTFKNAAPVPLASY*