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cn_combo_scaffold_1132_2

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(237..1220)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=12 Tax=pseudomallei group RepID=A1V8L1_BURMS similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 323.0
  • Bit_score: 347
  • Evalue 1.40e-92
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 323.0
  • Bit_score: 347
  • Evalue 3.00e-93
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIO87684.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 323.0
  • Bit_score: 347
  • Evalue 1.50e-92

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Taxonomy

Burkholderia pseudomallei → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGAACGCACACCACTTCAGCACGCTGCTCGAACACCCCGCCGACCGGCAGGCCTGCTGGGGCCGGATCAACACCTCGTACTTCGGCGCGCTGCGCGTGCAGTGCCTGGACACCGGCACCTTCGATGCGCGCATGGATGCCTACGAGCTGGGCCCGCTGGGCATGTTCATGATCGAGGCGCCCTCGCACCGCGTGGCGCGGCCCGACACCCGCAACGAGATCGCGCTCGACCAGCACTACAAGCTGGTGCTGCAGCTCGAAGGCCACGGCCACATCTCGCAGCGCGACCGCGAGTTCCACCTGCACCCCGGCGACTGGAGCCTGTACGACCCGCGCGTGCCCTACGCCATCACCAACCCCGAGCGCTCGCGCCTGCTGGCCATCACCATTCCGCGCCAGCAGTTCAAGGGCATGAAGATCCCCGACCTGCACACCTGCGAAGCGCACACGCCGGCCATGCAGGGGCTGTATGCGGTGCTCGGATCGTTCCTCACTTCACTGGCCGACCAGCTGCCGTCGCTGCCCAACGCGGTCGGCCGCTCGGTCAGCGACACCGTGCTGGGCCTGCTCGCATCCACGCTGGCCACGCACTCCGACGAGCAGTTCGGCGCGCACCCGGTGCCGGGCGTGCTCAAGGCGCGCGTGAAGCAGTTCGTGCATGCGCACCTCGCTGACCCGGCCCTGTCGCTGGACCTCATCGCGCAGCAGCTGCGCTGTTCCAAGCGCTACCTGCACCGCGTGTTCGAAGACGAAGACCAGACGCTCGACCGCTTCATCTGGCAGATGCGGCTGGAGCGCTGCAGCGAGGCGCTGCGCAACGCGGTGGGCCGGCGCGCCTCGGTGTCGGAGATCGCCTTTGCCTGGGGCTTCAACAGCAGCGCGCATTTCTGCCGCGTGTTCAAGGCGCAGTACGGCGTGTCGCCGCGCGAGTTCCAGAGGCGTGAAGCGCAGAGCTTGGCCGGTTCGGCGATGCTGACGCACTAG
PROTEIN sequence
Length: 328
MNAHHFSTLLEHPADRQACWGRINTSYFGALRVQCLDTGTFDARMDAYELGPLGMFMIEAPSHRVARPDTRNEIALDQHYKLVLQLEGHGHISQRDREFHLHPGDWSLYDPRVPYAITNPERSRLLAITIPRQQFKGMKIPDLHTCEAHTPAMQGLYAVLGSFLTSLADQLPSLPNAVGRSVSDTVLGLLASTLATHSDEQFGAHPVPGVLKARVKQFVHAHLADPALSLDLIAQQLRCSKRYLHRVFEDEDQTLDRFIWQMRLERCSEALRNAVGRRASVSEIAFAWGFNSSAHFCRVFKAQYGVSPREFQRREAQSLAGSAMLTH*