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cn_combo_scaffold_1132_3

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(1381..2721)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2K3J9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 446.0
  • Bit_score: 834
  • Evalue 6.70e-239
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL67838.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 446.0
  • Bit_score: 834
  • Evalue 9.40e-239
general substrate transporter similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 447.0
  • Bit_score: 830
  • Evalue 2.10e-238

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGAATCCCGCGCCTTCCACCGCGCAAAAGGGCACTGCCGCCGCGCACGCTTCGCCCGCACCCTCCTCGAAATTCGCCACCGTCCTGCGTGTGACCGGCGGCAACTTCATGGAGATGTTCGACTTCTTCCTGTTCGGCTTCTACGCCACGCAGATCTCGAAGGCGTTCTTCCCGGCCGGCGACGAGTTCGCCTCGCTGATGCTGACCTTCATGACCTTCGGCGCCGGCTTCCTGATGCGGCCGCTGGGCGCGATCTTTCTCGGCGCATACGTCGACCGCGTGGGCCGCCGCAAGGGCCTGATCGTCACGCTCGCGCTGATGGCCACCGGCACGCTGCTCATTGCCTGCGTGCCTTCTTACGCCACCATCGGCCTGGTGGCGCCGCTGCTGGTGCTCATCGGCCGGCTGCTGCAAGGCTTCTCGGCCGGCGTGGAACTGGGCGGCGTGTCGGTGTACCTGTCGGAAATGGCCACGCCGGGCCACAAGGGCTTCTACGTGAGCTGGCAGTCGGCCAGCCAGCAGGTGGCCATCGTCGTGGCGGCAGCCCTGGGCTACTGGCTCAACGTGACCTTCACCTCGCAGGAGATCGGCGACTTCTACTGGCGCGTGCCCTTCTTCGTGGGCTGCCTGATCGTGCCGGTGCTGTTCATCATCCGCCGCTCGCTGCAGGAGACCGAGGAGTTCATGGCGCGCAAGCACCGGCCCGACGCGCGCGAAATCTTCCGCTCGATGGTCACCAACTGGGGCCTGGTGGTCGCCGGGATGATGCTGGTGTCGATGACCACCGTGTCGTTCTACCTGATCACCGTCTACACGCCCACCTTCGGCAAGGCCGTGCTGCACCTGAGCACCACCGACGCGCTGGTCGTCACGCTGTGCGTGGCCATCTCCAACTTCATCTGGCTGCCGATCATGGGCGCGCTGTCGGACCGCGTGGGCCGCAAGCCGCTGCTGATCCTGTTCACGGTGCTGACCATCCTCACCGCCTACCCGTCGCTCAAGTGGCTGGTCGGCGCGCCGAGCTTCACGCGCATGCTCGAAGTCGAGCTGTGGCTGTCGTTCCTCTACGCCAGCTACAACGGCGCGATGGTGGTCGCGCTCACCGAGGTGATGCCCGTCAACGTGCGCACCGCCGGCTTCTCGCTGGCCTACAGCCTGGCGACGGCCGTGTTCGGCGGCTTCACGCCGGCCATCGCGACCGGGCTGATCGAGATGACCGGCGACAAGGGCGCGCCGGGGCTGTGGATGACGGCCGCCGCGATATGCGGGCTGATCGCCACGCTGGTGCTGTACCGGCGCAACGTGAATCCGGCGGACGCGCGGCGCGTGCCGGCGGTCTGA
PROTEIN sequence
Length: 447
MNPAPSTAQKGTAAAHASPAPSSKFATVLRVTGGNFMEMFDFFLFGFYATQISKAFFPAGDEFASLMLTFMTFGAGFLMRPLGAIFLGAYVDRVGRRKGLIVTLALMATGTLLIACVPSYATIGLVAPLLVLIGRLLQGFSAGVELGGVSVYLSEMATPGHKGFYVSWQSASQQVAIVVAAALGYWLNVTFTSQEIGDFYWRVPFFVGCLIVPVLFIIRRSLQETEEFMARKHRPDAREIFRSMVTNWGLVVAGMMLVSMTTVSFYLITVYTPTFGKAVLHLSTTDALVVTLCVAISNFIWLPIMGALSDRVGRKPLLILFTVLTILTAYPSLKWLVGAPSFTRMLEVELWLSFLYASYNGAMVVALTEVMPVNVRTAGFSLAYSLATAVFGGFTPAIATGLIEMTGDKGAPGLWMTAAAICGLIATLVLYRRNVNPADARRVPAV*