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cn_combo_scaffold_1132_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(23240..25837)

Top 3 Functional Annotations

Value Algorithm Source
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Variovorax sp. CF313 RepID=J2K3L6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 837.0
  • Bit_score: 1302
  • Evalue 0.0
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EJL67853.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 837.0
  • Bit_score: 1302
  • Evalue 0.0
putative poly-beta-1,6-N-acetyl-D-glucosamine export porin PgaA similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 773.0
  • Bit_score: 966
  • Evalue 4.70e-279

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2598
TTGGGTGGGCGTCCGTCGGCGCTGGCCTGCGCCTTGTCTCGTCACCTCGAACATGCATCACGAGGTTTTCCACCGATCGTTTGCGCGCTGGCCCTGGGTGCTTCATCCGCGGCCTTCGCGAATCCACCCGTCGCGGCCGTCGAACCCGCGTCGAACCCATCGGCAGCCTATGACGCGCAGCAGCACGACGCATTGATCGTCGCGCGTCGGGCGAACCGCATCGGTGCCGCGCAGGCATTGCAGCAGTTGAAGGGCTGGCTCGCCGCGCCGCTCGGCGACGCCGAACGACGGCGCGTGGTGTCCGATGCCGTTGCTATCGCAGCAGCCGACAGCCAGTTCGCCGAAGCCGTCGCGATCGCCCGCCAGGTTCCGCTCGCCGCGCTGAACGACTACGCCCTGGGCCCTCTCGCGCTGGCCGCGCGCCGCACGCACGACCTGGCGCTGCAGGGCGAAGTCATCGCCCTCTGGCGCGCCCGGCAGCCGGACGCGCGCGAACCGCGCATCCACGAAGCCTTCTGGCGGCTCGACAGCGGCGACATCGCCGGCGCAAAAGCCGTCTACGACACGCTCGCTCGGCAACCGACCCGGCAGGTCGAAGACCGCGTCGCCTTGCTCGAACTGCGCGGCGCCGTGGCTCGCGCCGAGAAGCAGCCGCTGCAGGCGCTCGCCGCCTACACCGAGGCCGGCGCGCTGCGGCCCGACCGCCGCGACCTGCGCCGCGAAACCGACTTCCTGCTCGCGGACAGCGGCGCCGCGTCGACCGCCTTCGACGACGCCGAAACCGCGGAGCGCGCCCACCCCGGCAGCTTTTCGCCGCTGGCCTTGTCCACGCTGCAACAGCAGGCGCTGGCACAGCGGCTGCACTGGGCCATCCAGGAACGCGATCAGCGCCTGGGCGCGGCGCGCGTGACGGCACTCGACCGCGTGTTGTCCGACCAGGAAGCCGCACTCGCCCGGCTCGACGCATCGGCCGCCCAAGCCACGCCTGAGGACGCCGACGCATGGCGCCAGTTGCGCGTGCGGCTGCTGTCCGACCGCCTGCTCGCGCTGGTGGAGCGCGGCCGCCCCGCCGACGCCATCGCGCTCTACGAATCGCTGCGCGCGGCCGGTGTCGACCTGCCCTTCTGGGGCCTCGGCGCCGCGGCCCGCGCCTTCGCGCAGGAGCGCCGCTCGATCGACGCCGTGCCGCTGTACGAAGCGGCCGTGGCCAAGGGCGGCGCCGACCTGCCGATGCCCGACGACATCTACTTCGGCCTGGTCTACGCCTACCTGGACACCGGCCGCTTCGAGGACGCCGAGGCCCTGCTGAAGCGGCTCGAAGAAGCAACGCCCGCGCTGATGCGCCTCACGCCCGAAGCCGGCCGGCCCAACGGCCAGTACACCGACGTGAGCGGCATGCGCGGCCTGCTGCAGCTCTACACCGACCGCGCGACGCTCGCGCAGCAGAGCTTCTCGACGCTGACCGGCAATGCGCCGCTGAATGCCGGCTATGCCTATGGCGCGGGCCAGACCGAGCGGCTGCGCGAGCATCCCGAGGCTGCCGTCGCGCGCTTCGAGGCGCAGGCGGCCGACCAGCCCTACGACATCAGCGCGCGCGCCGGCCATGTCGAAGCACTGCTCGACGCCGGCGAGTTCCGCCAGGCCCGCGAACGCGCCGAGTCGCTCGCGGCCGACGTGCCCGAGGCCGCCGAGGTGCGCGACGTGGAGCGCAAGCGCCGCGCCGCCACCGGGCCGCGGCTCGACGTCGACGCAGAGGCCTCGTCGGGCGGCGCGGCCATCGCCAACCGCGAATGGCGCATCGACAGCCGGCTCAGCTCCGGCCTCATCGACGACCAATGGCGCGTGTTCTACGACCAGACGCTGGGCCGCGGCACCACCGACATCGGCAACGCCAACTGGGCGCGCGGCGGCCTGGGCCTGAGCTGGCAGCAGGGCCGCTGGATGGCCGAAGGCGTGCTGCAGCATGCGAACAGCGGTCCCTACCGCAACAGCGTGGCGGGCCGCGTGGACTACCGCGCGGGCGATGCCTGGCGCTTTTCGGCCACCTACGACGGCGACAGCAAGGAGCTGCCGTGGAAAGCCCGCGTCGCCGGCATCGGCGCGCACGAGACCGGCGCGAGCGTGGGCTACGTGGTGAACGAGTCGCGCCGCTTCGACCTGCAATGGCAGCGCCTGGACTTCAGCGACGGCAACCTGCACAACGGCCTGGAGCTCGGCTGGCGCGAACGCTGGGTGAGCACGCCGCGCTTCCAGCTCGAAACGCGCCTGGGCGCCGGCACTAGCCGCGGCCGCGACATCGACACGCCCTACTTCAACCCGTCGAGCGACAGCACCGCGCAACTCGCGGTGCGCGCGCAGTGGCTCAACTGGAAGCGCGACGACCGCCAGTTCTTCCAGGCCGTGGAGCTCACGGGCGGCAACTACCGCCAGGCCGGCTTCGGCAGCGGCCCGCTGTGGAGCCTGCGCTACGAGCACCGCTGGGACCTCGGCCCCAGGTTCACGCTGCGCTACGGCCTGAGCATTTCCAGCCATCCCTACGACGGCGTGCGCGAGCGACAGCGCGGCGTCTTCCTGAACCTCTCGATGCCCCTGCAGTGA
PROTEIN sequence
Length: 866
LGGRPSALACALSRHLEHASRGFPPIVCALALGASSAAFANPPVAAVEPASNPSAAYDAQQHDALIVARRANRIGAAQALQQLKGWLAAPLGDAERRRVVSDAVAIAAADSQFAEAVAIARQVPLAALNDYALGPLALAARRTHDLALQGEVIALWRARQPDAREPRIHEAFWRLDSGDIAGAKAVYDTLARQPTRQVEDRVALLELRGAVARAEKQPLQALAAYTEAGALRPDRRDLRRETDFLLADSGAASTAFDDAETAERAHPGSFSPLALSTLQQQALAQRLHWAIQERDQRLGAARVTALDRVLSDQEAALARLDASAAQATPEDADAWRQLRVRLLSDRLLALVERGRPADAIALYESLRAAGVDLPFWGLGAAARAFAQERRSIDAVPLYEAAVAKGGADLPMPDDIYFGLVYAYLDTGRFEDAEALLKRLEEATPALMRLTPEAGRPNGQYTDVSGMRGLLQLYTDRATLAQQSFSTLTGNAPLNAGYAYGAGQTERLREHPEAAVARFEAQAADQPYDISARAGHVEALLDAGEFRQARERAESLAADVPEAAEVRDVERKRRAATGPRLDVDAEASSGGAAIANREWRIDSRLSSGLIDDQWRVFYDQTLGRGTTDIGNANWARGGLGLSWQQGRWMAEGVLQHANSGPYRNSVAGRVDYRAGDAWRFSATYDGDSKELPWKARVAGIGAHETGASVGYVVNESRRFDLQWQRLDFSDGNLHNGLELGWRERWVSTPRFQLETRLGAGTSRGRDIDTPYFNPSSDSTAQLAVRAQWLNWKRDDRQFFQAVELTGGNYRQAGFGSGPLWSLRYEHRWDLGPRFTLRYGLSISSHPYDGVRERQRGVFLNLSMPLQ*