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cn_combo_scaffold_1444_15

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 18007..19476

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XEN8_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 473.0
  • Bit_score: 862
  • Evalue 2.50e-247
transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 473.0
  • Bit_score: 862
  • Evalue 5.40e-248
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGU50799.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 473.0
  • Bit_score: 862
  • Evalue 3.50e-247

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
GTGTTTGTCCCCGTGTTGGGGTTTTTCGTGCACACGAAGCGTGCACGCCTTGCCGTGATCACTGTCAACCCTTCGCTGCCCGCGCCGCTGGTGCGCCAGCTCTACGACGCCCTGCTGGCGCAGATCGCATCGAGCGCCATGAAGCCCGGCGACAAGCTGCCTTCGGTGCGCGCGCTCGCCACCGACTGCGGCGTGAGCACCATGACCGTCACCAATGCCTACCAGCGCCTGGTGGCCGAGGGCCATGTCGAGGCGCGGCGCGCCAGCGGCTACTACGTGGCCGAGGCCGAGCGCGCGGCCACGCGGCGCAAGCCCTTCCTGGGCCGCACCTCGGTCGACTCGCTGTGGCTGCTCAAGCACGTCTACGAAGACGACCGCACCCTGCTGAACGCGGGCTGCGGCTGGATCCCGCCCGAGATGCTGCATATGGACGGCGTGCGCCGCGCGCTGGCCGCGCTCTCGCGCAAGCCGGGCGCCGGCCTGGCGAGCTACGGCACGCCCTACGGCTACCTGCCGCTGCGCCAGCAGATACAGACGCTGCTCGCGCAGCAGGGCATAGAGACCGCGCCGCACCAGATCGTGCTGACGCACGGCGCCTCGCAGGCGCTGAACCTGGTGGCGCGCTGCCTGCTGCAGCCGCGCGACGTGGTGCTGGTCGACGAGCCCGGCTCGACCAACCTGTACGCGATGCTGCGCTCGCTCGACCTGAAGCTGGTGGGCGTGGAACGCACCGTCAACGGCCCCGACCTCGCGGCGCTGCAGGCGCTGGCGCAGCGGCACGGCGCCAAGGCCTTCTTCACCTCCGGCAACCTGCACAACCCCACCGGCAGCCAGTGCACGCCGGCCGTGGCCTACCAGATTCTGCGGCTGGCCGAGCAGCTCGACTTCCACATCGTCGACAACGACGTGATGGCCGGGCTGGAGCCGCCCGGCGCGGCCACTCCGCTCGCGAGCCTGGACCGGCTGCGCCGGGTGATCCATGTCGGCAGCTTCTCCAAGACGGTGTCGCCCGCCCTGCGCGTGGGCTTCGTCGCCTGCAGCGAGGAGTTCGCCGAAAAGATGATCCTGCAGAAGATGGTCAACAGCCTCACCACTTCGGAGCTCACCGAGCGGCTGCTGCACGGCGTGCTGGTCGAGGGCCGCTACCGAGCCCATGTGGCGAAGCTGGCCGAACAGCTGCAGGCGGCGCAGCGCACCGTGTGCGACCGGCTGGAGGCGGCCGGCATGCAGCTGTTCACGCGTCCGGCGGGCGGCCCCTTCCTGTGGGCGCGGTTCGAGCGCGACGACGTCGACATGCGCGCGCTGGCGCAGCGCGCCATCGCAGAGAGCTTTCTGCTGGCGCCGGGCGACCTCTTTCGCACCGATCTGCGGCCCACGCCGTGGCTGCGCTTCAACGTGGGTTACGCGGACGACCCGAAGCTGTATCGTTTCCTGGCGCAAGAAGCGAAAAGGCTGCGCTCGAAGGCCTGA
PROTEIN sequence
Length: 490
VFVPVLGFFVHTKRARLAVITVNPSLPAPLVRQLYDALLAQIASSAMKPGDKLPSVRALATDCGVSTMTVTNAYQRLVAEGHVEARRASGYYVAEAERAATRRKPFLGRTSVDSLWLLKHVYEDDRTLLNAGCGWIPPEMLHMDGVRRALAALSRKPGAGLASYGTPYGYLPLRQQIQTLLAQQGIETAPHQIVLTHGASQALNLVARCLLQPRDVVLVDEPGSTNLYAMLRSLDLKLVGVERTVNGPDLAALQALAQRHGAKAFFTSGNLHNPTGSQCTPAVAYQILRLAEQLDFHIVDNDVMAGLEPPGAATPLASLDRLRRVIHVGSFSKTVSPALRVGFVACSEEFAEKMILQKMVNSLTTSELTERLLHGVLVEGRYRAHVAKLAEQLQAAQRTVCDRLEAAGMQLFTRPAGGPFLWARFERDDVDMRALAQRAIAESFLLAPGDLFRTDLRPTPWLRFNVGYADDPKLYRFLAQEAKRLRSKA*